Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF144AP50876 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF144AP50876 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RNF144AP50876 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF144AP50876 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF144AP50876 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.28■■□□□ 1
RNF144AP50876 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF144AP50876 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RNF144AP50876 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.28■■□□□ 1
RNF144AP50876 THA1P-201ENST00000590384 1145 ntBASIC21.28■■□□□ 1
RNF144AP50876 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF144AP50876 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RNF144AP50876 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
RNF144AP50876 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.28■■□□□ 1
RNF144AP50876 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.28■■□□□ 1
RNF144AP50876 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF144AP50876 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RNF144AP50876 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RNF144AP50876 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.27■■□□□ 1
RNF144AP50876 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.27■■□□□ 1
RNF144AP50876 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF144AP50876 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF144AP50876 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.27■■□□□ 1
RNF144AP50876 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF144AP50876 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.27■■□□□ 1
RNF144AP50876 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
RNF144AP50876 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.26■□□□□ 0.99
RNF144AP50876 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF144AP50876 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF144AP50876 YBX1P4-201ENST00000392794 808 ntBASIC21.26■□□□□ 0.99
RNF144AP50876 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.26■□□□□ 0.99
RNF144AP50876 AC103724.3-201ENST00000564481 992 ntBASIC21.26■□□□□ 0.99
RNF144AP50876 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF144AP50876 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.26■□□□□ 0.99
RNF144AP50876 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RNF144AP50876 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF144AP50876 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF144AP50876 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF144AP50876 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF144AP50876 AC011551.1-201ENST00000614101 683 ntBASIC21.25■□□□□ 0.99
RNF144AP50876 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF144AP50876 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF144AP50876 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF144AP50876 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF144AP50876 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF144AP50876 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF144AP50876 AC022616.5-201ENST00000518796 181 ntBASIC21.24■□□□□ 0.99
RNF144AP50876 MIR4281-201ENST00000580852 62 ntBASIC21.24■□□□□ 0.99
RNF144AP50876 MIR4508-201ENST00000584178 70 ntBASIC21.24■□□□□ 0.99
RNF144AP50876 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF144AP50876 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF144AP50876 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF144AP50876 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF144AP50876 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RNF144AP50876 AC141586.4-201ENST00000624558 1573 ntBASIC21.23■□□□□ 0.99
RNF144AP50876 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RNF144AP50876 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF144AP50876 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF144AP50876 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF144AP50876 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF144AP50876 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF144AP50876 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF144AP50876 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF144AP50876 RARRES2P1-201ENST00000474487 481 ntBASIC21.22■□□□□ 0.99
RNF144AP50876 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF144AP50876 AC012676.1-201ENST00000574705 1949 ntBASIC21.21■□□□□ 0.99
RNF144AP50876 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF144AP50876 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF144AP50876 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF144AP50876 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF144AP50876 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF144AP50876 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.21■□□□□ 0.99
RNF144AP50876 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RNF144AP50876 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RNF144AP50876 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF144AP50876 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF144AP50876 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF144AP50876 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF144AP50876 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF144AP50876 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF144AP50876 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.2■□□□□ 0.98
RNF144AP50876 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.2■□□□□ 0.98
RNF144AP50876 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RNF144AP50876 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
RNF144AP50876 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF144AP50876 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
RNF144AP50876 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF144AP50876 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF144AP50876 KRT18P24-201ENST00000344739 1156 ntBASIC21.19■□□□□ 0.98
RNF144AP50876 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF144AP50876 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF144AP50876 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RNF144AP50876 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RNF144AP50876 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF144AP50876 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RNF144AP50876 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RNF144AP50876 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF144AP50876 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF144AP50876 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF144AP50876 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms