Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AL033527.3-201ENST00000566366 1196 ntBASIC20.27■□□□□ 0.84
SRP9P49458 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRP9P49458 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SRP9P49458 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SRP9P49458 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRP9P49458 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.26■□□□□ 0.83
SRP9P49458 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRP9P49458 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SRP9P49458 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRP9P49458 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SRP9P49458 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRP9P49458 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.26■□□□□ 0.83
SRP9P49458 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.26■□□□□ 0.83
SRP9P49458 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SRP9P49458 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SRP9P49458 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.25■□□□□ 0.83
SRP9P49458 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRP9P49458 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRP9P49458 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.25■□□□□ 0.83
SRP9P49458 BHLHE23-202ENST00000612929 1109 ntBASIC20.25■□□□□ 0.83
SRP9P49458 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.25■□□□□ 0.83
SRP9P49458 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.25■□□□□ 0.83
SRP9P49458 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRP9P49458 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRP9P49458 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRP9P49458 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SRP9P49458 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRP9P49458 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRP9P49458 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.24■□□□□ 0.83
SRP9P49458 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.24■□□□□ 0.83
SRP9P49458 AC087393.1-201ENST00000582896 145 ntBASIC20.24■□□□□ 0.83
SRP9P49458 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRP9P49458 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRP9P49458 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SRP9P49458 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRP9P49458 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.24■□□□□ 0.83
SRP9P49458 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SRP9P49458 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SRP9P49458 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SRP9P49458 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SRP9P49458 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
SRP9P49458 AL117328.2-201ENST00000624617 1940 ntBASIC20.23■□□□□ 0.83
SRP9P49458 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SRP9P49458 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SRP9P49458 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SRP9P49458 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SRP9P49458 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.22■□□□□ 0.83
SRP9P49458 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SRP9P49458 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SRP9P49458 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SRP9P49458 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.22■□□□□ 0.83
SRP9P49458 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.22■□□□□ 0.83
SRP9P49458 AC074183.2-201ENST00000623112 922 ntBASIC20.22■□□□□ 0.83
SRP9P49458 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.22■□□□□ 0.83
SRP9P49458 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SRP9P49458 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SRP9P49458 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SRP9P49458 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SRP9P49458 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SRP9P49458 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.21■□□□□ 0.83
SRP9P49458 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SRP9P49458 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SRP9P49458 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SRP9P49458 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SRP9P49458 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SRP9P49458 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SRP9P49458 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.2■□□□□ 0.82
SRP9P49458 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.2■□□□□ 0.82
SRP9P49458 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SRP9P49458 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.2■□□□□ 0.82
SRP9P49458 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.2■□□□□ 0.82
SRP9P49458 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.2■□□□□ 0.82
SRP9P49458 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.2■□□□□ 0.82
SRP9P49458 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRP9P49458 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRP9P49458 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SRP9P49458 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRP9P49458 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
SRP9P49458 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
SRP9P49458 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRP9P49458 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.19■□□□□ 0.82
SRP9P49458 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.19■□□□□ 0.82
SRP9P49458 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRP9P49458 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SRP9P49458 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.19■□□□□ 0.82
SRP9P49458 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SRP9P49458 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SRP9P49458 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SRP9P49458 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRP9P49458 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRP9P49458 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRP9P49458 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.18■□□□□ 0.82
SRP9P49458 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.18■□□□□ 0.82
SRP9P49458 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRP9P49458 EP400NL-214ENST00000641289 2402 ntBASIC20.18■□□□□ 0.82
SRP9P49458 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRP9P49458 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SRP9P49458 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SRP9P49458 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SRP9P49458 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms