Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CENPAP49450 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CENPAP49450 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CENPAP49450 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CENPAP49450 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CENPAP49450 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CENPAP49450 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.65■□□□□ 0.9
CENPAP49450 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CENPAP49450 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CENPAP49450 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CENPAP49450 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CENPAP49450 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CENPAP49450 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.64■□□□□ 0.9
CENPAP49450 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.64■□□□□ 0.89
CENPAP49450 AC087393.1-201ENST00000582896 145 ntBASIC20.64■□□□□ 0.89
CENPAP49450 AC129492.7-201ENST00000622992 756 ntBASIC20.64■□□□□ 0.89
CENPAP49450 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CENPAP49450 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CENPAP49450 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CENPAP49450 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
CENPAP49450 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CENPAP49450 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CENPAP49450 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CENPAP49450 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CENPAP49450 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CENPAP49450 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CENPAP49450 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.63■□□□□ 0.89
CENPAP49450 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.63■□□□□ 0.89
CENPAP49450 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.63■□□□□ 0.89
CENPAP49450 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
CENPAP49450 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CENPAP49450 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CENPAP49450 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CENPAP49450 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.62■□□□□ 0.89
CENPAP49450 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CENPAP49450 AL592295.1-201ENST00000400984 884 ntBASIC20.62■□□□□ 0.89
CENPAP49450 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CENPAP49450 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.62■□□□□ 0.89
CENPAP49450 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CENPAP49450 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CENPAP49450 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.62■□□□□ 0.89
CENPAP49450 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CENPAP49450 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CENPAP49450 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CENPAP49450 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.62■□□□□ 0.89
CENPAP49450 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CENPAP49450 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CENPAP49450 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CENPAP49450 KRT18P60-201ENST00000312876 1297 ntBASIC20.61■□□□□ 0.89
CENPAP49450 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.61■□□□□ 0.89
CENPAP49450 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.61■□□□□ 0.89
CENPAP49450 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.61■□□□□ 0.89
CENPAP49450 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.61■□□□□ 0.89
CENPAP49450 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CENPAP49450 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
CENPAP49450 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CENPAP49450 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CENPAP49450 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CENPAP49450 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CENPAP49450 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.61■□□□□ 0.89
CENPAP49450 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CENPAP49450 AL161729.1-201ENST00000604104 1402 ntBASIC20.61■□□□□ 0.89
CENPAP49450 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CENPAP49450 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CENPAP49450 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CENPAP49450 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CENPAP49450 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CENPAP49450 DUX4L18-201ENST00000553347 1267 ntBASIC20.6■□□□□ 0.89
CENPAP49450 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CENPAP49450 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CENPAP49450 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.6■□□□□ 0.89
CENPAP49450 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CENPAP49450 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CENPAP49450 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CENPAP49450 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CENPAP49450 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.59■□□□□ 0.89
CENPAP49450 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CENPAP49450 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.59■□□□□ 0.89
CENPAP49450 AC139795.1-202ENST00000500444 432 ntBASIC20.59■□□□□ 0.89
CENPAP49450 ABHD17AP5-201ENST00000580133 923 ntBASIC20.59■□□□□ 0.89
CENPAP49450 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CENPAP49450 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CENPAP49450 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CENPAP49450 AC090877.2-201ENST00000558441 1738 ntBASIC20.58■□□□□ 0.89
CENPAP49450 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CENPAP49450 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CENPAP49450 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CENPAP49450 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CENPAP49450 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.58■□□□□ 0.88
CENPAP49450 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CENPAP49450 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CENPAP49450 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CENPAP49450 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CENPAP49450 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CENPAP49450 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CENPAP49450 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
CENPAP49450 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.57■□□□□ 0.88
CENPAP49450 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CENPAP49450 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.57■□□□□ 0.88
CENPAP49450 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms