Protein–RNA interactions for Protein: P42843

SKP2, F-box protein SKP2, yeast

Predictions only

Length 763 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	P42843	MRC1	YCL061C	3291 nt		5.61	□□□□□ -1.51
SKP2	P42843	IDP1	YDL066W	1287 nt		5.61	□□□□□ -1.51
SKP2	P42843	DHH1	YDL160C	1521 nt		5.61	□□□□□ -1.51
SKP2	P42843	PCL9	YDL179W	915 nt		5.61	□□□□□ -1.51
SKP2	P42843	GCS1	YDL226C	1059 nt		5.61	□□□□□ -1.51
SKP2	P42843	BGL2	YGR282C	942 nt		5.61	□□□□□ -1.51
SKP2	P42843	YIL171W-A	YIL171W-A	453 nt		5.61	□□□□□ -1.51
SKP2	P42843	YJL220W	YJL220W	453 nt		5.61	□□□□□ -1.51
SKP2	P42843	PPA2	YMR267W	933 nt		5.61	□□□□□ -1.51
SKP2	P42843	PDR16	YNL231C	1056 nt		5.61	□□□□□ -1.51
SKP2	P42843	NDJ1	YOL104C	1059 nt		5.61	□□□□□ -1.51
SKP2	P42843	YFL034W	YFL034W	3222 nt		5.61	□□□□□ -1.51
SKP2	P42843	SNT2	YGL131C	4212 nt		5.6	□□□□□ -1.51
SKP2	P42843	YFR052C-A	YFR052C-A	306 nt		5.6	□□□□□ -1.51
SKP2	P42843	YLL017W	YLL017W	312 nt		5.6	□□□□□ -1.51
SKP2	P42843	NHP6B	YBR089C-A	300 nt		5.6	□□□□□ -1.51
SKP2	P42843	GAL10	YBR019C	2100 nt		5.6	□□□□□ -1.51
SKP2	P42843	DBF2	YGR092W	1719 nt		5.6	□□□□□ -1.51
SKP2	P42843	SLD2	YKL108W	1362 nt		5.59	□□□□□ -1.51
SKP2	P42843	GYP1	YOR070C	1914 nt		5.59	□□□□□ -1.51
SKP2	P42843	LSM6	YDR378C	261 nt		5.59	□□□□□ -1.51
SKP2	P42843	YMR030W-A	YMR030W-A	291 nt		5.59	□□□□□ -1.51
SKP2	P42843	NHP6A	YPR052C	282 nt		5.59	□□□□□ -1.51
SKP2	P42843	SUE1	YPR151C	621 nt		5.59	□□□□□ -1.51
SKP2	P42843	CTF18	YMR078C	2226 nt		5.59	□□□□□ -1.52
SKP2	P42843	ATG1	YGL180W	2694 nt		5.58	□□□□□ -1.52
SKP2	P42843	FMP48	YGR052W	1110 nt		5.58	□□□□□ -1.52
SKP2	P42843	PSR1	YLL010C	1284 nt		5.58	□□□□□ -1.52
SKP2	P42843	MFA2	YNL145W	117 nt		5.58	□□□□□ -1.52
SKP2	P42843	MRI1	YPR118W	1236 nt		5.58	□□□□□ -1.52
SKP2	P42843	YIL067C	YIL067C	2037 nt		5.58	□□□□□ -1.52
SKP2	P42843	DFG5	YMR238W	1377 nt		5.57	□□□□□ -1.52
SKP2	P42843	YMD8	YML038C	1329 nt		5.57	□□□□□ -1.52
SKP2	P42843	GIP2	YER054C	1647 nt		5.57	□□□□□ -1.52
SKP2	P42843	BZZ1	YHR114W	1902 nt		5.57	□□□□□ -1.52
SKP2	P42843	MED2	YDL005C	1296 nt		5.57	□□□□□ -1.52
SKP2	P42843	YDL121C	YDL121C	450 nt		5.57	□□□□□ -1.52
SKP2	P42843	COX18	YGR062C	951 nt		5.57	□□□□□ -1.52
SKP2	P42843	YBL029W	YBL029W	1131 nt		5.57	□□□□□ -1.52
SKP2	P42843	YOL131W	YOL131W	327 nt		5.57	□□□□□ -1.52
SKP2	P42843	CAM1	YPL048W	1248 nt		5.57	□□□□□ -1.52
SKP2	P42843	HAS1	YMR290C	1518 nt		5.57	□□□□□ -1.52
SKP2	P42843	UTP18	YJL069C	1785 nt		5.57	□□□□□ -1.52
SKP2	P42843	PAF1	YBR279W	1338 nt		5.56	□□□□□ -1.52
SKP2	P42843	SNM1	YDR478W	597 nt		5.56	□□□□□ -1.52
SKP2	P42843	PXR1	YGR280C	816 nt		5.56	□□□□□ -1.52
SKP2	P42843	HSP150	YJL159W	1242 nt		5.56	□□□□□ -1.52
SKP2	P42843	GPM3	YOL056W	912 nt		5.56	□□□□□ -1.52
SKP2	P42843	LAP2	YNL045W	2016 nt		5.56	□□□□□ -1.52
SKP2	P42843	SCT1	YBL011W	2280 nt		5.56	□□□□□ -1.52
SKP2	P42843	MTC5	YDR128W	3447 nt		5.56	□□□□□ -1.52
SKP2	P42843	AVT3	YKL146W	2079 nt		5.55	□□□□□ -1.52
SKP2	P42843	ECM3	YOR092W	1842 nt		5.55	□□□□□ -1.52
SKP2	P42843	RAD53	YPL153C	2466 nt		5.55	□□□□□ -1.52
SKP2	P42843	APE1	YKL103C	1545 nt		5.55	□□□□□ -1.52
SKP2	P42843	RPL12A	YEL054C	498 nt		5.55	□□□□□ -1.52
SKP2	P42843	YLR317W	YLR317W	435 nt		5.55	□□□□□ -1.52
SKP2	P42843	YLR402W	YLR402W	192 nt		5.55	□□□□□ -1.52
SKP2	P42843	RPS19B	YNL302C	435 nt		5.55	□□□□□ -1.52
SKP2	P42843	ARR1	YPR199C	885 nt		5.55	□□□□□ -1.52
SKP2	P42843	FRE7	YOL152W	1863 nt		5.55	□□□□□ -1.52
SKP2	P42843	PRT1	YOR361C	2292 nt		5.55	□□□□□ -1.52
SKP2	P42843	PTK2	YJR059W	2457 nt		5.55	□□□□□ -1.52
SKP2	P42843	HRP1	YOL123W	1605 nt		5.55	□□□□□ -1.52
SKP2	P42843	HXT5	YHR096C	1779 nt		5.55	□□□□□ -1.52
SKP2	P42843	MIF2	YKL089W	1650 nt		5.54	□□□□□ -1.52
SKP2	P42843	YJL215C	YJL215C	360 nt		5.54	□□□□□ -1.52
SKP2	P42843	RHO4	YKR055W	876 nt		5.54	□□□□□ -1.52
SKP2	P42843	MAC1	YMR021C	1254 nt		5.54	□□□□□ -1.52
SKP2	P42843	CCS1	YMR038C	750 nt		5.54	□□□□□ -1.52
SKP2	P42843	DCC1	YCL016C	1143 nt		5.54	□□□□□ -1.52
SKP2	P42843	AMA1	YGR225W	1782 nt		5.54	□□□□□ -1.52
SKP2	P42843	GAS3	YMR215W	1575 nt		5.54	□□□□□ -1.52
SKP2	P42843	JEM1	YJL073W	1938 nt		5.53	□□□□□ -1.52
SKP2	P42843	ASP1	YDR321W	1146 nt		5.53	□□□□□ -1.52
SKP2	P42843	PUS6	YGR169C	1215 nt		5.53	□□□□□ -1.52
SKP2	P42843	YPR109W	YPR109W	885 nt		5.53	□□□□□ -1.52
SKP2	P42843	SER33	YIL074C	1410 nt		5.52	□□□□□ -1.53
SKP2	P42843	YGR011W	YGR011W	327 nt		5.52	□□□□□ -1.53
SKP2	P42843	REX3	YLR107W	1215 nt		5.52	□□□□□ -1.53
SKP2	P42843	ADD37	YMR184W	597 nt		5.52	□□□□□ -1.53
SKP2	P42843	YPL113C	YPL113C	1191 nt		5.52	□□□□□ -1.53
SKP2	P42843	NFI1	YOR156C	2181 nt		5.52	□□□□□ -1.53
SKP2	P42843	HSF1	YGL073W	2502 nt		5.51	□□□□□ -1.53
SKP2	P42843	RPS16B	YDL083C	432 nt		5.51	□□□□□ -1.53
SKP2	P42843	MCM21	YDR318W	1107 nt		5.51	□□□□□ -1.53
SKP2	P42843	SCS2	YER120W	735 nt		5.51	□□□□□ -1.53
SKP2	P42843	SEH1	YGL100W	1050 nt		5.51	□□□□□ -1.53
SKP2	P42843	URE2	YNL229C	1065 nt		5.51	□□□□□ -1.53
SKP2	P42843	POS5	YPL188W	1245 nt		5.51	□□□□□ -1.53
SKP2	P42843	UBA3	YPR066W	900 nt		5.51	□□□□□ -1.53
SKP2	P42843	MAD3	YJL013C	1548 nt		5.51	□□□□□ -1.53
SKP2	P42843	YTA12	YMR089C	2478 nt		5.51	□□□□□ -1.53
SKP2	P42843	VTH1	YIL173W	4650 nt		5.51	□□□□□ -1.53
SKP2	P42843	VTH2	YJL222W	4650 nt		5.51	□□□□□ -1.53
SKP2	P42843	LCB2	YDR062W	1686 nt		5.5	□□□□□ -1.53
SKP2	P42843	MPC1	YGL080W	393 nt		5.5	□□□□□ -1.53
SKP2	P42843	MF(ALPHA)2	YGL089C	363 nt		5.5	□□□□□ -1.53
SKP2	P42843	SPC34	YKR037C	888 nt		5.5	□□□□□ -1.53
SKP2	P42843	CKA2	YOR061W	1020 nt		5.5	□□□□□ -1.53

Retrieved 100 of 7,029 protein–RNA pairs in 17 ms