Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 MPP6YNR024W 561 nt5.97□□□□□ -1.45
PUB1P32588 DFR1YOR236W 636 nt5.97□□□□□ -1.45 RIP-Chip
PUB1P32588 RBD2YPL246C 789 nt5.97□□□□□ -1.45 RIP-Chip
PUB1P32588 RRG8YPR116W 834 nt5.97□□□□□ -1.45
PUB1P32588 COQ1YBR003W 1422 nt5.97□□□□□ -1.45
PUB1P32588 MRS2YOR334W 1413 nt5.97□□□□□ -1.45
PUB1P32588 MSC3YLR219W 2187 nt5.97□□□□□ -1.45
PUB1P32588 VRP1YLR337C 2454 nt5.96□□□□□ -1.46
PUB1P32588 PLB3YOL011W 2061 nt5.96□□□□□ -1.46 RIP-Chip
PUB1P32588 CPR4YCR069W 957 nt5.96□□□□□ -1.46
PUB1P32588 GLC7YER133W 939 nt5.96□□□□□ -1.46
PUB1P32588 YKL018C-AYKL018C-A 300 nt5.96□□□□□ -1.46 RIP-Chip
PUB1P32588 SRY1YKL218C 981 nt5.96□□□□□ -1.46
PUB1P32588 CDC123YLR215C 1083 nt5.96□□□□□ -1.46 RIP-Chip
PUB1P32588 TEX1YNL253W 1269 nt5.96□□□□□ -1.46
PUB1P32588 YNR061CYNR061C 660 nt5.96□□□□□ -1.46 RIP-Chip
PUB1P32588 SPO19YPL130W 672 nt5.96□□□□□ -1.46
PUB1P32588 ARG81YML099C 2643 nt5.96□□□□□ -1.46
PUB1P32588 MPH3YJR160C 1809 nt5.96□□□□□ -1.46
PUB1P32588 UTR2YEL040W 1404 nt5.96□□□□□ -1.46
PUB1P32588 SGV1YPR161C 1974 nt5.95□□□□□ -1.46
PUB1P32588 DAS2YDR020C 699 nt5.95□□□□□ -1.46 RIP-Chip
PUB1P32588 PRE3YJL001W 648 nt5.95□□□□□ -1.46
PUB1P32588 DYN3YMR299C 939 nt5.95□□□□□ -1.46
PUB1P32588 KSH1YNL024C-A 219 nt5.95□□□□□ -1.46 RIP-Chip
PUB1P32588 BIO3YNR058W 1443 nt5.95□□□□□ -1.46
PUB1P32588 YOL035CYOL035C 303 nt5.95□□□□□ -1.46
PUB1P32588 YPL250W-AYPL250W-A 288 nt5.95□□□□□ -1.46
PUB1P32588 ARO4YBR249C 1113 nt5.95□□□□□ -1.46
PUB1P32588 YIL001WYIL001W 1542 nt5.94□□□□□ -1.46
PUB1P32588 SPS22YCL048W 1392 nt5.94□□□□□ -1.46
PUB1P32588 PAP1YKR002W 1707 nt5.94□□□□□ -1.46
PUB1P32588 NUP49YGL172W 1419 nt5.94□□□□□ -1.46
PUB1P32588 snR83snR83 306 nt5.94□□□□□ -1.46
PUB1P32588 SKI8YGL213C 1194 nt5.94□□□□□ -1.46
PUB1P32588 BET4YJL031C 984 nt5.94□□□□□ -1.46
PUB1P32588 YJL215CYJL215C 360 nt5.94□□□□□ -1.46
PUB1P32588 SIC1YLR079W 855 nt5.94□□□□□ -1.46 RIP-Chip
PUB1P32588 YAR053WYAR053W 297 nt5.94□□□□□ -1.46
PUB1P32588 DUS4YLR405W 1104 nt5.94□□□□□ -1.46
PUB1P32588 RPN13YLR421C 471 nt5.94□□□□□ -1.46
PUB1P32588 ECM30YLR436C 3825 nt5.94□□□□□ -1.46
PUB1P32588 LDB16YCL005W 771 nt5.94□□□□□ -1.46
PUB1P32588 CDC16YKL022C 2523 nt5.94□□□□□ -1.46
PUB1P32588 YLR446WYLR446W 1302 nt5.94□□□□□ -1.46
PUB1P32588 DOT1YDR440W 1749 nt5.94□□□□□ -1.46
PUB1P32588 SMP1YBR182C 1359 nt5.93□□□□□ -1.46
PUB1P32588 THI2YBR240C 1353 nt5.93□□□□□ -1.46
PUB1P32588 ATP16YDL004W 483 nt5.93□□□□□ -1.46 RIP-Chip
PUB1P32588 CNN1YFR046C 1086 nt5.93□□□□□ -1.46
PUB1P32588 YGR273CYGR273C 525 nt5.93□□□□□ -1.46
PUB1P32588 YHL046W-AYHL046W-A 327 nt5.93□□□□□ -1.46
PUB1P32588 RPP1YHR062C 882 nt5.93□□□□□ -1.46
PUB1P32588 SQT1YIR012W 1296 nt5.93□□□□□ -1.46
PUB1P32588 MRP49YKL167C 414 nt5.93□□□□□ -1.46
PUB1P32588 PER33YLR064W 822 nt5.93□□□□□ -1.46 RIP-Chip
PUB1P32588 YOR238WYOR238W 912 nt5.93□□□□□ -1.46
PUB1P32588 FIT2YOR382W 462 nt5.93□□□□□ -1.46
PUB1P32588 YJL163CYJL163C 1668 nt5.93□□□□□ -1.46
PUB1P32588 CIK1YMR198W 1785 nt5.93□□□□□ -1.46
PUB1P32588 COX10YPL172C 1389 nt5.93□□□□□ -1.46
PUB1P32588 MSY1YPL097W 1479 nt5.92□□□□□ -1.46
PUB1P32588 YFL012W-AYFL012W-A 375 nt5.92□□□□□ -1.46
PUB1P32588 IRC7YFR055W 1023 nt5.92□□□□□ -1.46
PUB1P32588 CWC23YGL128C 852 nt5.92□□□□□ -1.46
PUB1P32588 YGR204C-AYGR204C-A 114 nt5.92□□□□□ -1.46
PUB1P32588 NVJ1YHR195W 966 nt5.92□□□□□ -1.46
PUB1P32588 YIL163CYIL163C 354 nt5.92□□□□□ -1.46
PUB1P32588 HOT13YKL084W 351 nt5.92□□□□□ -1.46
PUB1P32588 YHC1YLR298C 696 nt5.92□□□□□ -1.46
PUB1P32588 LDB7YBL006C 543 nt5.92□□□□□ -1.46
PUB1P32588 YBL029WYBL029W 1131 nt5.92□□□□□ -1.46
PUB1P32588 KTR1YOR099W 1182 nt5.92□□□□□ -1.46 RIP-Chip
PUB1P32588 YOR292CYOR292C 930 nt5.92□□□□□ -1.46 RIP-Chip
PUB1P32588 YBR144CYBR144C 315 nt5.92□□□□□ -1.46
PUB1P32588 YBR219CYBR219C 384 nt5.92□□□□□ -1.46
PUB1P32588 ATG18YFR021W 1503 nt5.92□□□□□ -1.46
PUB1P32588 CCC2YDR270W 3015 nt5.92□□□□□ -1.46
PUB1P32588 PTR2YKR093W 1806 nt5.92□□□□□ -1.46 RIP-Chip
PUB1P32588 YJL045WYJL045W 1905 nt5.91□□□□□ -1.46
PUB1P32588 IWR1YDL115C 1062 nt5.91□□□□□ -1.46
PUB1P32588 OPI7YDR360W 435 nt5.91□□□□□ -1.46
PUB1P32588 RSM28YDR494W 1086 nt5.91□□□□□ -1.46
PUB1P32588 HEM2YGL040C 1029 nt5.91□□□□□ -1.46
PUB1P32588 RRP46YGR095C 672 nt5.91□□□□□ -1.46
PUB1P32588 SRB5YGR104C 924 nt5.91□□□□□ -1.46
PUB1P32588 DOG2YHR043C 741 nt5.91□□□□□ -1.46
PUB1P32588 DOG1YHR044C 741 nt5.91□□□□□ -1.46
PUB1P32588 LIN1YHR156C 1023 nt5.91□□□□□ -1.46
PUB1P32588 SYS1YJL004C 612 nt5.91□□□□□ -1.46 RIP-Chip
PUB1P32588 RFA3YJL173C 369 nt5.91□□□□□ -1.46
PUB1P32588 YJR011CYJR011C 786 nt5.91□□□□□ -1.46
PUB1P32588 CDC11YJR076C 1248 nt5.91□□□□□ -1.46
PUB1P32588 YNL120CYNL120C 486 nt5.91□□□□□ -1.46
PUB1P32588 MED4YOR174W 855 nt5.91□□□□□ -1.46
PUB1P32588 SER1YOR184W 1188 nt5.91□□□□□ -1.46
PUB1P32588 KNS1YLL019C 2214 nt5.9□□□□□ -1.46 RIP-Chip
PUB1P32588 YCR001WYCR001W 315 nt5.9□□□□□ -1.46
PUB1P32588 YDR282CYDR282C 1245 nt5.9□□□□□ -1.46
PUB1P32588 IPK1YDR315C 846 nt5.9□□□□□ -1.46
Retrieved 100 of 7,029 protein–RNA pairs in 93.1 ms