Protein–RNA interactions for Protein: P19623

SRM, Spermidine synthase, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP19623 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRMP19623 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SRMP19623 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRMP19623 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
SRMP19623 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.05■□□□□ 0.8
SRMP19623 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SRMP19623 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRMP19623 EP400NL-214ENST00000641289 2402 ntBASIC20.04■□□□□ 0.8
SRMP19623 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SRMP19623 ABHD17AP4-201ENST00000411545 909 ntBASIC20.04■□□□□ 0.8
SRMP19623 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.04■□□□□ 0.8
SRMP19623 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRMP19623 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRMP19623 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRMP19623 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRMP19623 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRMP19623 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SRMP19623 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRMP19623 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.03■□□□□ 0.8
SRMP19623 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.03■□□□□ 0.8
SRMP19623 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SRMP19623 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.03■□□□□ 0.8
SRMP19623 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.03■□□□□ 0.8
SRMP19623 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.03■□□□□ 0.8
SRMP19623 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SRMP19623 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRMP19623 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.02■□□□□ 0.8
SRMP19623 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SRMP19623 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SRMP19623 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRMP19623 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.02■□□□□ 0.8
SRMP19623 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRMP19623 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRMP19623 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRMP19623 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRMP19623 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SRMP19623 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRMP19623 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.02■□□□□ 0.8
SRMP19623 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SRMP19623 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SRMP19623 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.02■□□□□ 0.79
SRMP19623 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.01■□□□□ 0.79
SRMP19623 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SRMP19623 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRMP19623 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRMP19623 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SRMP19623 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SRMP19623 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRMP19623 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SRMP19623 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SRMP19623 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SRMP19623 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRMP19623 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRMP19623 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRMP19623 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SRMP19623 AC092068.2-201ENST00000590491 1708 ntBASIC20.01■□□□□ 0.79
SRMP19623 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRMP19623 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SRMP19623 DUSP8P3-201ENST00000399571 1760 ntBASIC20■□□□□ 0.79
SRMP19623 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SRMP19623 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SRMP19623 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRMP19623 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20■□□□□ 0.79
SRMP19623 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20■□□□□ 0.79
SRMP19623 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SRMP19623 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRMP19623 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SRMP19623 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.99■□□□□ 0.79
SRMP19623 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SRMP19623 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRMP19623 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.99■□□□□ 0.79
SRMP19623 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRMP19623 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SRMP19623 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SRMP19623 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRMP19623 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.99■□□□□ 0.79
SRMP19623 C1orf229-201ENST00000623686 2258 ntBASIC19.99■□□□□ 0.79
SRMP19623 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRMP19623 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRMP19623 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.98■□□□□ 0.79
SRMP19623 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRMP19623 LINC00565-201ENST00000562710 2331 ntBASIC19.98■□□□□ 0.79
SRMP19623 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRMP19623 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRMP19623 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SRMP19623 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.98■□□□□ 0.79
SRMP19623 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SRMP19623 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SRMP19623 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SRMP19623 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SRMP19623 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRMP19623 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRMP19623 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.97■□□□□ 0.79
SRMP19623 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SRMP19623 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.97■□□□□ 0.79
SRMP19623 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
SRMP19623 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SRMP19623 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SRMP19623 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
SRMP19623 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms