Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 UNC93B3-201ENST00000308076 687 ntBASIC17.96■□□□□ 0.47
CD28P10747 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CD28P10747 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CD28P10747 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CD28P10747 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD28P10747 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CD28P10747 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD28P10747 AC005703.6-201ENST00000623265 1329 ntBASIC17.96■□□□□ 0.46
CD28P10747 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
CD28P10747 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CD28P10747 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD28P10747 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD28P10747 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CD28P10747 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CD28P10747 DUSP8P4-201ENST00000399538 1761 ntBASIC17.95■□□□□ 0.46
CD28P10747 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.95■□□□□ 0.46
CD28P10747 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CD28P10747 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CD28P10747 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CD28P10747 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CD28P10747 AC133561.4-201ENST00000566112 224 ntBASIC17.95■□□□□ 0.46
CD28P10747 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD28P10747 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CD28P10747 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD28P10747 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.94■□□□□ 0.46
CD28P10747 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.94■□□□□ 0.46
CD28P10747 AC106739.1-201ENST00000617035 715 ntBASIC17.94■□□□□ 0.46
CD28P10747 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CD28P10747 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.93■□□□□ 0.46
CD28P10747 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.93■□□□□ 0.46
CD28P10747 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CD28P10747 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.93■□□□□ 0.46
CD28P10747 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD28P10747 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.93■□□□□ 0.46
CD28P10747 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.93■□□□□ 0.46
CD28P10747 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CD28P10747 AL136162.1-201ENST00000607711 1078 ntBASIC17.93■□□□□ 0.46
CD28P10747 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.93■□□□□ 0.46
CD28P10747 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CD28P10747 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD28P10747 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.93■□□□□ 0.46
CD28P10747 AC131274.2-201ENST00000580697 1507 ntBASIC17.93■□□□□ 0.46
CD28P10747 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CD28P10747 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.92■□□□□ 0.46
CD28P10747 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.92■□□□□ 0.46
CD28P10747 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.92■□□□□ 0.46
CD28P10747 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD28P10747 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD28P10747 AC091060.1-201ENST00000623524 1766 ntBASIC17.92■□□□□ 0.46
CD28P10747 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD28P10747 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC17.92■□□□□ 0.46
CD28P10747 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD28P10747 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.92■□□□□ 0.46
CD28P10747 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.92■□□□□ 0.46
CD28P10747 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD28P10747 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD28P10747 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.92■□□□□ 0.46
CD28P10747 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.92■□□□□ 0.46
CD28P10747 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD28P10747 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CD28P10747 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CD28P10747 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.91■□□□□ 0.46
CD28P10747 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.91■□□□□ 0.46
CD28P10747 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD28P10747 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CD28P10747 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CD28P10747 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC17.91■□□□□ 0.46
CD28P10747 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD28P10747 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD28P10747 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD28P10747 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD28P10747 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.9■□□□□ 0.46
CD28P10747 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.9■□□□□ 0.46
CD28P10747 AC142381.2-201ENST00000566120 298 ntBASIC17.9■□□□□ 0.46
CD28P10747 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CD28P10747 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CD28P10747 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CD28P10747 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CD28P10747 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD28P10747 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD28P10747 AC135279.3-201ENST00000610945 1311 ntBASIC17.89■□□□□ 0.45
CD28P10747 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD28P10747 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CD28P10747 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CD28P10747 AC145676.1-201ENST00000514988 2004 ntBASIC17.89■□□□□ 0.45
CD28P10747 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.89■□□□□ 0.45
CD28P10747 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CD28P10747 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CD28P10747 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC17.88■□□□□ 0.45
CD28P10747 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD28P10747 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CD28P10747 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.88■□□□□ 0.45
CD28P10747 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CD28P10747 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.88■□□□□ 0.45
CD28P10747 MIR6089-201ENST00000616698 64 ntBASIC17.88■□□□□ 0.45
CD28P10747 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.88■□□□□ 0.45
CD28P10747 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CD28P10747 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CD28P10747 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CD28P10747 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms