Protein–RNA interactions for Protein: P0DKX4

SMIM18, Small integral membrane protein 18, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18P0DKX4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMIM18P0DKX4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMIM18P0DKX4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
SMIM18P0DKX4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.13■□□□□ 0.97
SMIM18P0DKX4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SMIM18P0DKX4 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SMIM18P0DKX4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.13■□□□□ 0.97
SMIM18P0DKX4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SMIM18P0DKX4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMIM18P0DKX4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMIM18P0DKX4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.12■□□□□ 0.97
SMIM18P0DKX4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMIM18P0DKX4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMIM18P0DKX4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.12■□□□□ 0.97
SMIM18P0DKX4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SMIM18P0DKX4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SMIM18P0DKX4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SMIM18P0DKX4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
SMIM18P0DKX4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SMIM18P0DKX4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMIM18P0DKX4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMIM18P0DKX4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMIM18P0DKX4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SMIM18P0DKX4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SMIM18P0DKX4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMIM18P0DKX4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMIM18P0DKX4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMIM18P0DKX4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SMIM18P0DKX4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SMIM18P0DKX4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
SMIM18P0DKX4 AC092667.1-201ENST00000434301 2586 ntBASIC21.1■□□□□ 0.97
SMIM18P0DKX4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMIM18P0DKX4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.1■□□□□ 0.97
SMIM18P0DKX4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.1■□□□□ 0.97
SMIM18P0DKX4 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.1■□□□□ 0.97
SMIM18P0DKX4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.1■□□□□ 0.97
SMIM18P0DKX4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SMIM18P0DKX4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMIM18P0DKX4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMIM18P0DKX4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMIM18P0DKX4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMIM18P0DKX4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMIM18P0DKX4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
SMIM18P0DKX4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SMIM18P0DKX4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMIM18P0DKX4 MIR762-201ENST00000390236 83 ntBASIC21.09■□□□□ 0.97
SMIM18P0DKX4 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.09■□□□□ 0.97
SMIM18P0DKX4 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SMIM18P0DKX4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SMIM18P0DKX4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMIM18P0DKX4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SMIM18P0DKX4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
SMIM18P0DKX4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SMIM18P0DKX4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.08■□□□□ 0.97
SMIM18P0DKX4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMIM18P0DKX4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
SMIM18P0DKX4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.08■□□□□ 0.96
SMIM18P0DKX4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SMIM18P0DKX4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SMIM18P0DKX4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SMIM18P0DKX4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM18P0DKX4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SMIM18P0DKX4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM18P0DKX4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM18P0DKX4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SMIM18P0DKX4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM18P0DKX4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.06■□□□□ 0.96
SMIM18P0DKX4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM18P0DKX4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM18P0DKX4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.06■□□□□ 0.96
SMIM18P0DKX4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM18P0DKX4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM18P0DKX4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SMIM18P0DKX4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.06■□□□□ 0.96
SMIM18P0DKX4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM18P0DKX4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SMIM18P0DKX4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SMIM18P0DKX4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.05■□□□□ 0.96
SMIM18P0DKX4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM18P0DKX4 AL359504.2-201ENST00000605506 1601 ntBASIC21.05■□□□□ 0.96
SMIM18P0DKX4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM18P0DKX4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM18P0DKX4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM18P0DKX4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.05■□□□□ 0.96
SMIM18P0DKX4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.05■□□□□ 0.96
SMIM18P0DKX4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.05■□□□□ 0.96
SMIM18P0DKX4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SMIM18P0DKX4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM18P0DKX4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SMIM18P0DKX4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.04■□□□□ 0.96
SMIM18P0DKX4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM18P0DKX4 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.04■□□□□ 0.96
SMIM18P0DKX4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.04■□□□□ 0.96
SMIM18P0DKX4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM18P0DKX4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM18P0DKX4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM18P0DKX4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM18P0DKX4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM18P0DKX4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM18P0DKX4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms