Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF728P0DKX0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF728P0DKX0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF728P0DKX0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF728P0DKX0 LONRF2P2-201ENST00000439212 571 ntBASIC19.48■□□□□ 0.71
ZNF728P0DKX0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.48■□□□□ 0.71
ZNF728P0DKX0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.48■□□□□ 0.71
ZNF728P0DKX0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ZNF728P0DKX0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF728P0DKX0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF728P0DKX0 ABCB10P4-201ENST00000566803 2184 ntBASIC19.47■□□□□ 0.71
ZNF728P0DKX0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.47■□□□□ 0.71
ZNF728P0DKX0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF728P0DKX0 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF728P0DKX0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ZNF728P0DKX0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.47■□□□□ 0.71
ZNF728P0DKX0 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF728P0DKX0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ZNF728P0DKX0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
ZNF728P0DKX0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF728P0DKX0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF728P0DKX0 FOXO3B-201ENST00000395675 1928 ntBASIC19.47■□□□□ 0.71
ZNF728P0DKX0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF728P0DKX0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.46■□□□□ 0.71
ZNF728P0DKX0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF728P0DKX0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF728P0DKX0 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF728P0DKX0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF728P0DKX0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.46■□□□□ 0.71
ZNF728P0DKX0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.46■□□□□ 0.71
ZNF728P0DKX0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.46■□□□□ 0.71
ZNF728P0DKX0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF728P0DKX0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF728P0DKX0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
ZNF728P0DKX0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF728P0DKX0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF728P0DKX0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.45■□□□□ 0.7
ZNF728P0DKX0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.45■□□□□ 0.7
ZNF728P0DKX0 AC019171.1-201ENST00000601251 1056 ntBASIC19.45■□□□□ 0.7
ZNF728P0DKX0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF728P0DKX0 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.45■□□□□ 0.7
ZNF728P0DKX0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF728P0DKX0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.45■□□□□ 0.7
ZNF728P0DKX0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF728P0DKX0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF728P0DKX0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.44■□□□□ 0.7
ZNF728P0DKX0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF728P0DKX0 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF728P0DKX0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ZNF728P0DKX0 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.43■□□□□ 0.7
ZNF728P0DKX0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF728P0DKX0 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF728P0DKX0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.43■□□□□ 0.7
ZNF728P0DKX0 AC079834.2-201ENST00000609776 1949 ntBASIC19.43■□□□□ 0.7
ZNF728P0DKX0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.43■□□□□ 0.7
ZNF728P0DKX0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ZNF728P0DKX0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF728P0DKX0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
ZNF728P0DKX0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF728P0DKX0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ZNF728P0DKX0 AL592295.1-201ENST00000400984 884 ntBASIC19.42■□□□□ 0.7
ZNF728P0DKX0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF728P0DKX0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF728P0DKX0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF728P0DKX0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF728P0DKX0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF728P0DKX0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNF728P0DKX0 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF728P0DKX0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF728P0DKX0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNF728P0DKX0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNF728P0DKX0 AC010980.1-201ENST00000587192 1142 ntBASIC19.41■□□□□ 0.7
ZNF728P0DKX0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF728P0DKX0 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF728P0DKX0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF728P0DKX0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF728P0DKX0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF728P0DKX0 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF728P0DKX0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.4■□□□□ 0.7
ZNF728P0DKX0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF728P0DKX0 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.4■□□□□ 0.7
ZNF728P0DKX0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.4■□□□□ 0.7
ZNF728P0DKX0 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF728P0DKX0 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF728P0DKX0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
ZNF728P0DKX0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF728P0DKX0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF728P0DKX0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF728P0DKX0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF728P0DKX0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF728P0DKX0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF728P0DKX0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.4■□□□□ 0.7
ZNF728P0DKX0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ZNF728P0DKX0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ZNF728P0DKX0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ZNF728P0DKX0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF728P0DKX0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF728P0DKX0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.39■□□□□ 0.69
ZNF728P0DKX0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.39■□□□□ 0.69
ZNF728P0DKX0 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms