Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.29■■□□□ 1.32
MT-ND3P03897 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
MT-ND3P03897 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MT-ND3P03897 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
MT-ND3P03897 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MT-ND3P03897 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
MT-ND3P03897 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.28■■□□□ 1.32
MT-ND3P03897 AC079834.2-201ENST00000609776 1949 ntBASIC23.28■■□□□ 1.32
MT-ND3P03897 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MT-ND3P03897 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MT-ND3P03897 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.28■■□□□ 1.32
MT-ND3P03897 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.28■■□□□ 1.32
MT-ND3P03897 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
MT-ND3P03897 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MT-ND3P03897 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MT-ND3P03897 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
MT-ND3P03897 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.27■■□□□ 1.32
MT-ND3P03897 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
MT-ND3P03897 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
MT-ND3P03897 AC139795.1-202ENST00000500444 432 ntBASIC23.27■■□□□ 1.32
MT-ND3P03897 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
MT-ND3P03897 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
MT-ND3P03897 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
MT-ND3P03897 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
MT-ND3P03897 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
MT-ND3P03897 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.26■■□□□ 1.31
MT-ND3P03897 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.26■■□□□ 1.31
MT-ND3P03897 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
MT-ND3P03897 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
MT-ND3P03897 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
MT-ND3P03897 C9orf163-202ENST00000624034 2573 ntBASIC23.26■■□□□ 1.31
MT-ND3P03897 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
MT-ND3P03897 FOXO3B-201ENST00000395675 1928 ntBASIC23.25■■□□□ 1.31
MT-ND3P03897 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
MT-ND3P03897 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
MT-ND3P03897 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
MT-ND3P03897 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.25■■□□□ 1.31
MT-ND3P03897 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.25■■□□□ 1.31
MT-ND3P03897 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
MT-ND3P03897 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
MT-ND3P03897 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.25■■□□□ 1.31
MT-ND3P03897 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.24■■□□□ 1.31
MT-ND3P03897 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
MT-ND3P03897 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
MT-ND3P03897 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
MT-ND3P03897 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
MT-ND3P03897 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
MT-ND3P03897 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
MT-ND3P03897 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.24■■□□□ 1.31
MT-ND3P03897 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.24■■□□□ 1.31
MT-ND3P03897 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
MT-ND3P03897 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
MT-ND3P03897 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
MT-ND3P03897 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
MT-ND3P03897 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.23■■□□□ 1.31
MT-ND3P03897 SPCS2P3-201ENST00000500401 656 ntBASIC23.23■■□□□ 1.31
MT-ND3P03897 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.23■■□□□ 1.31
MT-ND3P03897 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.23■■□□□ 1.31
MT-ND3P03897 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.23■■□□□ 1.31
MT-ND3P03897 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
MT-ND3P03897 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.23■■□□□ 1.31
MT-ND3P03897 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.23■■□□□ 1.31
MT-ND3P03897 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
MT-ND3P03897 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MT-ND3P03897 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
MT-ND3P03897 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
MT-ND3P03897 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.22■■□□□ 1.31
MT-ND3P03897 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MT-ND3P03897 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MT-ND3P03897 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
MT-ND3P03897 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MT-ND3P03897 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
MT-ND3P03897 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MT-ND3P03897 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MT-ND3P03897 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.22■■□□□ 1.31
MT-ND3P03897 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
MT-ND3P03897 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.21■■□□□ 1.31
MT-ND3P03897 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.2■■□□□ 1.3
MT-ND3P03897 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
MT-ND3P03897 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
MT-ND3P03897 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.2■■□□□ 1.3
MT-ND3P03897 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
MT-ND3P03897 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.2■■□□□ 1.3
MT-ND3P03897 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
MT-ND3P03897 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MT-ND3P03897 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.19■■□□□ 1.3
MT-ND3P03897 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
MT-ND3P03897 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.19■■□□□ 1.3
MT-ND3P03897 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MT-ND3P03897 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MT-ND3P03897 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MT-ND3P03897 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
MT-ND3P03897 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.18■■□□□ 1.3
MT-ND3P03897 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
MT-ND3P03897 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.18■■□□□ 1.3
MT-ND3P03897 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
MT-ND3P03897 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
MT-ND3P03897 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
MT-ND3P03897 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.18■■□□□ 1.3
MT-ND3P03897 KRT18P10-201ENST00000388836 1287 ntBASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms