Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.68■□□□□ 0.58
SCAF4O95104 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCAF4O95104 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCAF4O95104 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SCAF4O95104 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCAF4O95104 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCAF4O95104 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCAF4O95104 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.67■□□□□ 0.58
SCAF4O95104 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SCAF4O95104 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.67■□□□□ 0.58
SCAF4O95104 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCAF4O95104 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.67■□□□□ 0.58
SCAF4O95104 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCAF4O95104 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.67■□□□□ 0.58
SCAF4O95104 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCAF4O95104 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCAF4O95104 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCAF4O95104 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCAF4O95104 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCAF4O95104 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SCAF4O95104 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.66■□□□□ 0.58
SCAF4O95104 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SCAF4O95104 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCAF4O95104 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCAF4O95104 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCAF4O95104 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SCAF4O95104 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCAF4O95104 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCAF4O95104 AC004812.2-201ENST00000611079 2094 ntBASIC18.65■□□□□ 0.58
SCAF4O95104 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.65■□□□□ 0.58
SCAF4O95104 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCAF4O95104 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.65■□□□□ 0.58
SCAF4O95104 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SCAF4O95104 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SCAF4O95104 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCAF4O95104 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.64■□□□□ 0.57
SCAF4O95104 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCAF4O95104 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.64■□□□□ 0.57
SCAF4O95104 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCAF4O95104 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
SCAF4O95104 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCAF4O95104 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.64■□□□□ 0.57
SCAF4O95104 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCAF4O95104 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
SCAF4O95104 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCAF4O95104 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCAF4O95104 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCAF4O95104 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCAF4O95104 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCAF4O95104 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCAF4O95104 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCAF4O95104 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.63■□□□□ 0.57
SCAF4O95104 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SCAF4O95104 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCAF4O95104 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.62■□□□□ 0.57
SCAF4O95104 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCAF4O95104 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCAF4O95104 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCAF4O95104 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SCAF4O95104 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.62■□□□□ 0.57
SCAF4O95104 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SCAF4O95104 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SCAF4O95104 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.61■□□□□ 0.57
SCAF4O95104 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SCAF4O95104 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SCAF4O95104 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCAF4O95104 AL157400.5-201ENST00000507624 621 ntBASIC18.61■□□□□ 0.57
SCAF4O95104 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SCAF4O95104 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.61■□□□□ 0.57
SCAF4O95104 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.61■□□□□ 0.57
SCAF4O95104 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCAF4O95104 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCAF4O95104 LINC00565-201ENST00000562710 2331 ntBASIC18.61■□□□□ 0.57
SCAF4O95104 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCAF4O95104 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SCAF4O95104 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCAF4O95104 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SCAF4O95104 RNF126P1-201ENST00000567452 1320 ntBASIC18.6■□□□□ 0.57
SCAF4O95104 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.6■□□□□ 0.57
SCAF4O95104 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCAF4O95104 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCAF4O95104 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCAF4O95104 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SCAF4O95104 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCAF4O95104 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCAF4O95104 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SCAF4O95104 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.59■□□□□ 0.57
SCAF4O95104 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCAF4O95104 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SCAF4O95104 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCAF4O95104 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SCAF4O95104 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
SCAF4O95104 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCAF4O95104 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SCAF4O95104 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCAF4O95104 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCAF4O95104 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCAF4O95104 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.59■□□□□ 0.57
SCAF4O95104 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SCAF4O95104 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms