Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TSPAN9O75954 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TSPAN9O75954 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.52■□□□□ 0.72
TSPAN9O75954 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.52■□□□□ 0.72
TSPAN9O75954 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TSPAN9O75954 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TSPAN9O75954 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TSPAN9O75954 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
TSPAN9O75954 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN9O75954 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN9O75954 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN9O75954 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
TSPAN9O75954 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
TSPAN9O75954 DUX4L9-201ENST00000449051 1259 ntBASIC19.51■□□□□ 0.71
TSPAN9O75954 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
TSPAN9O75954 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN9O75954 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN9O75954 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN9O75954 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN9O75954 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN9O75954 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TSPAN9O75954 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.5■□□□□ 0.71
TSPAN9O75954 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.5■□□□□ 0.71
TSPAN9O75954 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TSPAN9O75954 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
TSPAN9O75954 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TSPAN9O75954 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TSPAN9O75954 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TSPAN9O75954 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.5■□□□□ 0.71
TSPAN9O75954 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.5■□□□□ 0.71
TSPAN9O75954 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TSPAN9O75954 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TSPAN9O75954 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.5■□□□□ 0.71
TSPAN9O75954 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
TSPAN9O75954 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TSPAN9O75954 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TSPAN9O75954 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TSPAN9O75954 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TSPAN9O75954 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TSPAN9O75954 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.49■□□□□ 0.71
TSPAN9O75954 AC074183.2-201ENST00000623112 922 ntBASIC19.49■□□□□ 0.71
TSPAN9O75954 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
TSPAN9O75954 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.49■□□□□ 0.71
TSPAN9O75954 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TSPAN9O75954 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN9O75954 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN9O75954 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN9O75954 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.48■□□□□ 0.71
TSPAN9O75954 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN9O75954 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN9O75954 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.47■□□□□ 0.71
TSPAN9O75954 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TSPAN9O75954 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TSPAN9O75954 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TSPAN9O75954 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TSPAN9O75954 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TSPAN9O75954 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.47■□□□□ 0.71
TSPAN9O75954 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TSPAN9O75954 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
TSPAN9O75954 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TSPAN9O75954 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TSPAN9O75954 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
TSPAN9O75954 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSPAN9O75954 AC142472.1-201ENST00000612013 1741 ntBASIC19.46■□□□□ 0.71
TSPAN9O75954 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSPAN9O75954 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TSPAN9O75954 SPCS2P3-201ENST00000500401 656 ntBASIC19.46■□□□□ 0.71
TSPAN9O75954 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.46■□□□□ 0.71
TSPAN9O75954 AL359504.2-201ENST00000605506 1601 ntBASIC19.46■□□□□ 0.71
TSPAN9O75954 WHAMMP3-201ENST00000611636 1609 ntBASIC19.46■□□□□ 0.71
TSPAN9O75954 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TSPAN9O75954 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.46■□□□□ 0.71
TSPAN9O75954 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.45■□□□□ 0.7
TSPAN9O75954 AP004609.3-201ENST00000610705 1884 ntBASIC19.45■□□□□ 0.7
TSPAN9O75954 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN9O75954 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN9O75954 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN9O75954 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TSPAN9O75954 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN9O75954 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.45■□□□□ 0.7
TSPAN9O75954 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.45■□□□□ 0.7
TSPAN9O75954 MIR6765-201ENST00000614092 87 ntBASIC19.45■□□□□ 0.7
TSPAN9O75954 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.45■□□□□ 0.7
TSPAN9O75954 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN9O75954 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.45■□□□□ 0.7
TSPAN9O75954 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN9O75954 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN9O75954 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN9O75954 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN9O75954 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.44■□□□□ 0.7
TSPAN9O75954 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TSPAN9O75954 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSPAN9O75954 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.44■□□□□ 0.7
TSPAN9O75954 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSPAN9O75954 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSPAN9O75954 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.44■□□□□ 0.7
TSPAN9O75954 BHLHE23-202ENST00000612929 1109 ntBASIC19.44■□□□□ 0.7
TSPAN9O75954 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TSPAN9O75954 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TSPAN9O75954 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms