Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM3O75382 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM3O75382 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.31■■□□□ 1
TRIM3O75382 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM3O75382 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.31■■□□□ 1
TRIM3O75382 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
TRIM3O75382 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRIM3O75382 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
TRIM3O75382 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.31■■□□□ 1
TRIM3O75382 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.31■■□□□ 1
TRIM3O75382 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM3O75382 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM3O75382 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.31■■□□□ 1
TRIM3O75382 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.3■■□□□ 1
TRIM3O75382 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM3O75382 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM3O75382 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM3O75382 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM3O75382 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM3O75382 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM3O75382 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM3O75382 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM3O75382 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM3O75382 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.29■■□□□ 1
TRIM3O75382 AF131216.4-201ENST00000638924 1588 ntBASIC21.29■■□□□ 1
TRIM3O75382 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM3O75382 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.29■■□□□ 1
TRIM3O75382 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.29■■□□□ 1
TRIM3O75382 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.29■■□□□ 1
TRIM3O75382 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.29■■□□□ 1
TRIM3O75382 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM3O75382 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM3O75382 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM3O75382 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.28■■□□□ 1
TRIM3O75382 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM3O75382 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.28■■□□□ 1
TRIM3O75382 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.28■■□□□ 1
TRIM3O75382 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.28■■□□□ 1
TRIM3O75382 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TRIM3O75382 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM3O75382 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.27■■□□□ 1
TRIM3O75382 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM3O75382 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.27■■□□□ 1
TRIM3O75382 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM3O75382 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM3O75382 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.27■■□□□ 1
TRIM3O75382 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.27■■□□□ 1
TRIM3O75382 MIR6089-201ENST00000616698 64 ntBASIC21.27■■□□□ 1
TRIM3O75382 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.27■■□□□ 1
TRIM3O75382 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.27■■□□□ 1
TRIM3O75382 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.27■■□□□ 1
TRIM3O75382 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRIM3O75382 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
TRIM3O75382 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM3O75382 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM3O75382 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
TRIM3O75382 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM3O75382 AC138932.3-201ENST00000567634 1902 ntBASIC21.26■□□□□ 0.99
TRIM3O75382 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM3O75382 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM3O75382 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM3O75382 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIM3O75382 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM3O75382 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.26■□□□□ 0.99
TRIM3O75382 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIM3O75382 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM3O75382 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM3O75382 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM3O75382 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TRIM3O75382 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM3O75382 AC092028.1-203ENST00000608262 953 ntBASIC21.24■□□□□ 0.99
TRIM3O75382 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM3O75382 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.24■□□□□ 0.99
TRIM3O75382 AP003733.4-201ENST00000623785 1697 ntBASIC21.24■□□□□ 0.99
TRIM3O75382 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM3O75382 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM3O75382 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM3O75382 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.23■□□□□ 0.99
TRIM3O75382 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM3O75382 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.23■□□□□ 0.99
TRIM3O75382 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
TRIM3O75382 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.23■□□□□ 0.99
TRIM3O75382 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM3O75382 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM3O75382 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM3O75382 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM3O75382 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM3O75382 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM3O75382 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM3O75382 AL356441.2-201ENST00000443009 864 ntBASIC21.22■□□□□ 0.99
TRIM3O75382 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.22■□□□□ 0.99
TRIM3O75382 UNC93B8-201ENST00000511903 705 ntBASIC21.22■□□□□ 0.99
TRIM3O75382 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM3O75382 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM3O75382 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM3O75382 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM3O75382 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM3O75382 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM3O75382 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
TRIM3O75382 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms