Protein–RNA interactions for Protein: O60896

RAMP3, Receptor activity-modifying protein 3, humanhuman

Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAMP3O60896 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RAMP3O60896 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.79■□□□□ 0.6
RAMP3O60896 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAMP3O60896 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAMP3O60896 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAMP3O60896 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAMP3O60896 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAMP3O60896 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.78■□□□□ 0.6
RAMP3O60896 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.78■□□□□ 0.6
RAMP3O60896 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.78■□□□□ 0.6
RAMP3O60896 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAMP3O60896 SPCS2P3-201ENST00000500401 656 ntBASIC18.78■□□□□ 0.6
RAMP3O60896 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAMP3O60896 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAMP3O60896 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAMP3O60896 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAMP3O60896 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.77■□□□□ 0.6
RAMP3O60896 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAMP3O60896 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAMP3O60896 AL592293.1-201ENST00000502889 1188 ntBASIC18.77■□□□□ 0.6
RAMP3O60896 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.77■□□□□ 0.6
RAMP3O60896 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RAMP3O60896 AC018755.3-202ENST00000596210 929 ntBASIC18.77■□□□□ 0.6
RAMP3O60896 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RAMP3O60896 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAMP3O60896 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAMP3O60896 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.77■□□□□ 0.6
RAMP3O60896 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAMP3O60896 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAMP3O60896 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.76■□□□□ 0.59
RAMP3O60896 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.76■□□□□ 0.59
RAMP3O60896 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RAMP3O60896 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAMP3O60896 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.76■□□□□ 0.59
RAMP3O60896 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAMP3O60896 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAMP3O60896 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAMP3O60896 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAMP3O60896 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAMP3O60896 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAMP3O60896 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RAMP3O60896 AC090877.2-201ENST00000558441 1738 ntBASIC18.75■□□□□ 0.59
RAMP3O60896 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAMP3O60896 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.75■□□□□ 0.59
RAMP3O60896 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.75■□□□□ 0.59
RAMP3O60896 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAMP3O60896 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.75■□□□□ 0.59
RAMP3O60896 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.75■□□□□ 0.59
RAMP3O60896 AC129492.7-201ENST00000622992 756 ntBASIC18.75■□□□□ 0.59
RAMP3O60896 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RAMP3O60896 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAMP3O60896 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAMP3O60896 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAMP3O60896 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAMP3O60896 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RAMP3O60896 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RAMP3O60896 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RAMP3O60896 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RAMP3O60896 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAMP3O60896 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAMP3O60896 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.74■□□□□ 0.59
RAMP3O60896 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.74■□□□□ 0.59
RAMP3O60896 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.74■□□□□ 0.59
RAMP3O60896 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAMP3O60896 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.73■□□□□ 0.59
RAMP3O60896 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAMP3O60896 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAMP3O60896 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAMP3O60896 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAMP3O60896 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAMP3O60896 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RAMP3O60896 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAMP3O60896 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAMP3O60896 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RAMP3O60896 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAMP3O60896 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
RAMP3O60896 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAMP3O60896 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAMP3O60896 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAMP3O60896 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
RAMP3O60896 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAMP3O60896 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RAMP3O60896 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAMP3O60896 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.72■□□□□ 0.59
RAMP3O60896 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAMP3O60896 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAMP3O60896 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RAMP3O60896 AC087393.1-201ENST00000582896 145 ntBASIC18.72■□□□□ 0.59
RAMP3O60896 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
RAMP3O60896 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.72■□□□□ 0.59
RAMP3O60896 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAMP3O60896 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAMP3O60896 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAMP3O60896 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAMP3O60896 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAMP3O60896 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAMP3O60896 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.71■□□□□ 0.59
RAMP3O60896 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAMP3O60896 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAMP3O60896 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms