Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
PRAMEF11O60813 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
PRAMEF11O60813 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
PRAMEF11O60813 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.45■■□□□ 1.34
PRAMEF11O60813 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PRAMEF11O60813 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.45■■□□□ 1.34
PRAMEF11O60813 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.45■■□□□ 1.34
PRAMEF11O60813 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
PRAMEF11O60813 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.45■■□□□ 1.34
PRAMEF11O60813 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
PRAMEF11O60813 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PRAMEF11O60813 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.45■■□□□ 1.34
PRAMEF11O60813 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PRAMEF11O60813 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PRAMEF11O60813 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PRAMEF11O60813 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.44■■□□□ 1.34
PRAMEF11O60813 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PRAMEF11O60813 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
PRAMEF11O60813 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.44■■□□□ 1.34
PRAMEF11O60813 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PRAMEF11O60813 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
PRAMEF11O60813 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PRAMEF11O60813 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PRAMEF11O60813 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.43■■□□□ 1.34
PRAMEF11O60813 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.43■■□□□ 1.34
PRAMEF11O60813 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.43■■□□□ 1.34
PRAMEF11O60813 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PRAMEF11O60813 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.42■■□□□ 1.34
PRAMEF11O60813 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.42■■□□□ 1.34
PRAMEF11O60813 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.42■■□□□ 1.34
PRAMEF11O60813 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.42■■□□□ 1.34
PRAMEF11O60813 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.42■■□□□ 1.34
PRAMEF11O60813 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PRAMEF11O60813 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PRAMEF11O60813 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
PRAMEF11O60813 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.41■■□□□ 1.34
PRAMEF11O60813 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PRAMEF11O60813 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PRAMEF11O60813 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PRAMEF11O60813 TSPY9P-201ENST00000440215 945 ntBASIC23.41■■□□□ 1.34
PRAMEF11O60813 TSPY11P-201ENST00000442607 1045 ntBASIC23.41■■□□□ 1.34
PRAMEF11O60813 UNC93B8-201ENST00000511903 705 ntBASIC23.41■■□□□ 1.34
PRAMEF11O60813 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PRAMEF11O60813 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PRAMEF11O60813 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
PRAMEF11O60813 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PRAMEF11O60813 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
PRAMEF11O60813 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.4■■□□□ 1.34
PRAMEF11O60813 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.4■■□□□ 1.34
PRAMEF11O60813 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.4■■□□□ 1.34
PRAMEF11O60813 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PRAMEF11O60813 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.4■■□□□ 1.34
PRAMEF11O60813 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
PRAMEF11O60813 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
PRAMEF11O60813 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.39■■□□□ 1.33
PRAMEF11O60813 MIR6722-201ENST00000617286 78 ntBASIC23.39■■□□□ 1.33
PRAMEF11O60813 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.39■■□□□ 1.33
PRAMEF11O60813 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PRAMEF11O60813 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PRAMEF11O60813 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PRAMEF11O60813 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PRAMEF11O60813 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PRAMEF11O60813 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PRAMEF11O60813 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.38■■□□□ 1.33
PRAMEF11O60813 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.38■■□□□ 1.33
PRAMEF11O60813 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.38■■□□□ 1.33
PRAMEF11O60813 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.38■■□□□ 1.33
PRAMEF11O60813 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PRAMEF11O60813 AC004812.2-201ENST00000611079 2094 ntBASIC23.37■■□□□ 1.33
PRAMEF11O60813 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PRAMEF11O60813 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.37■■□□□ 1.33
PRAMEF11O60813 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.37■■□□□ 1.33
PRAMEF11O60813 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.37■■□□□ 1.33
PRAMEF11O60813 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PRAMEF11O60813 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.37■■□□□ 1.33
PRAMEF11O60813 MTDHP2-201ENST00000601468 714 ntBASIC23.37■■□□□ 1.33
PRAMEF11O60813 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PRAMEF11O60813 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PRAMEF11O60813 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PRAMEF11O60813 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
PRAMEF11O60813 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.37■■□□□ 1.33
PRAMEF11O60813 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PRAMEF11O60813 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
PRAMEF11O60813 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PRAMEF11O60813 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PRAMEF11O60813 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PRAMEF11O60813 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PRAMEF11O60813 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
PRAMEF11O60813 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PRAMEF11O60813 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
PRAMEF11O60813 AC010997.5-201ENST00000609182 354 ntBASIC23.36■■□□□ 1.33
PRAMEF11O60813 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PRAMEF11O60813 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.36■■□□□ 1.33
PRAMEF11O60813 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PRAMEF11O60813 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
PRAMEF11O60813 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PRAMEF11O60813 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.35■■□□□ 1.33
PRAMEF11O60813 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PRAMEF11O60813 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PRAMEF11O60813 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms