Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
NPHS1O60500 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NPHS1O60500 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NPHS1O60500 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.45■■□□□ 1.18
NPHS1O60500 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
NPHS1O60500 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NPHS1O60500 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NPHS1O60500 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
NPHS1O60500 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
NPHS1O60500 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.45■■□□□ 1.18
NPHS1O60500 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NPHS1O60500 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NPHS1O60500 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NPHS1O60500 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
NPHS1O60500 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
NPHS1O60500 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
NPHS1O60500 AC018755.3-202ENST00000596210 929 ntBASIC22.44■■□□□ 1.18
NPHS1O60500 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
NPHS1O60500 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.44■■□□□ 1.18
NPHS1O60500 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.43■■□□□ 1.18
NPHS1O60500 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.43■■□□□ 1.18
NPHS1O60500 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.43■■□□□ 1.18
NPHS1O60500 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.43■■□□□ 1.18
NPHS1O60500 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.43■■□□□ 1.18
NPHS1O60500 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.43■■□□□ 1.18
NPHS1O60500 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
NPHS1O60500 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
NPHS1O60500 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
NPHS1O60500 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.43■■□□□ 1.18
NPHS1O60500 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NPHS1O60500 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.43■■□□□ 1.18
NPHS1O60500 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
NPHS1O60500 AC092068.2-201ENST00000590491 1708 ntBASIC22.43■■□□□ 1.18
NPHS1O60500 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.42■■□□□ 1.18
NPHS1O60500 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.42■■□□□ 1.18
NPHS1O60500 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
NPHS1O60500 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
NPHS1O60500 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
NPHS1O60500 AC087393.1-201ENST00000582896 145 ntBASIC22.42■■□□□ 1.18
NPHS1O60500 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
NPHS1O60500 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NPHS1O60500 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.41■■□□□ 1.18
NPHS1O60500 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
NPHS1O60500 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NPHS1O60500 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NPHS1O60500 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
NPHS1O60500 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NPHS1O60500 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
NPHS1O60500 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
NPHS1O60500 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
NPHS1O60500 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NPHS1O60500 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NPHS1O60500 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NPHS1O60500 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NPHS1O60500 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
NPHS1O60500 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
NPHS1O60500 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NPHS1O60500 SPCS2P3-201ENST00000500401 656 ntBASIC22.4■■□□□ 1.18
NPHS1O60500 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NPHS1O60500 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NPHS1O60500 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.4■■□□□ 1.18
NPHS1O60500 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NPHS1O60500 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NPHS1O60500 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NPHS1O60500 DUSP8P3-201ENST00000399571 1760 ntBASIC22.4■■□□□ 1.18
NPHS1O60500 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NPHS1O60500 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.39■■□□□ 1.18
NPHS1O60500 RNF126P1-201ENST00000567452 1320 ntBASIC22.39■■□□□ 1.18
NPHS1O60500 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
NPHS1O60500 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.39■■□□□ 1.17
NPHS1O60500 AL592293.1-201ENST00000502889 1188 ntBASIC22.39■■□□□ 1.17
NPHS1O60500 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
NPHS1O60500 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.17
NPHS1O60500 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.39■■□□□ 1.17
NPHS1O60500 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
NPHS1O60500 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
NPHS1O60500 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NPHS1O60500 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.39■■□□□ 1.17
NPHS1O60500 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.17
NPHS1O60500 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NPHS1O60500 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
NPHS1O60500 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
NPHS1O60500 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NPHS1O60500 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NPHS1O60500 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.38■■□□□ 1.17
NPHS1O60500 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.38■■□□□ 1.17
NPHS1O60500 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.38■■□□□ 1.17
NPHS1O60500 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
NPHS1O60500 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.38■■□□□ 1.17
NPHS1O60500 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
NPHS1O60500 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NPHS1O60500 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NPHS1O60500 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NPHS1O60500 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NPHS1O60500 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
NPHS1O60500 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NPHS1O60500 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NPHS1O60500 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NPHS1O60500 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NPHS1O60500 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms