Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SSX4O60224 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SSX4O60224 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SSX4O60224 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSX4O60224 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.68■□□□□ 0.9
SSX4O60224 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.68■□□□□ 0.9
SSX4O60224 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SSX4O60224 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSX4O60224 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.68■□□□□ 0.9
SSX4O60224 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.68■□□□□ 0.9
SSX4O60224 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SSX4O60224 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SSX4O60224 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSX4O60224 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SSX4O60224 PVT1_1.1-201ENST00000615125 194 ntBASIC20.67■□□□□ 0.9
SSX4O60224 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SSX4O60224 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.67■□□□□ 0.9
SSX4O60224 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SSX4O60224 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.66■□□□□ 0.9
SSX4O60224 ABCB10P4-201ENST00000566803 2184 ntBASIC20.66■□□□□ 0.9
SSX4O60224 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSX4O60224 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SSX4O60224 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSX4O60224 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.66■□□□□ 0.9
SSX4O60224 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.66■□□□□ 0.9
SSX4O60224 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSX4O60224 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SSX4O60224 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.66■□□□□ 0.9
SSX4O60224 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.66■□□□□ 0.9
SSX4O60224 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSX4O60224 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSX4O60224 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SSX4O60224 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.66■□□□□ 0.9
SSX4O60224 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SSX4O60224 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SSX4O60224 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.66■□□□□ 0.9
SSX4O60224 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSX4O60224 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSX4O60224 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SSX4O60224 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SSX4O60224 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSX4O60224 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSX4O60224 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSX4O60224 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSX4O60224 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.65■□□□□ 0.9
SSX4O60224 AC009299.2-201ENST00000482477 511 ntBASIC20.65■□□□□ 0.9
SSX4O60224 AC103834.1-201ENST00000520383 144 ntBASIC20.65■□□□□ 0.9
SSX4O60224 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSX4O60224 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SSX4O60224 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SSX4O60224 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.64■□□□□ 0.89
SSX4O60224 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSX4O60224 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSX4O60224 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SSX4O60224 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SSX4O60224 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSX4O60224 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSX4O60224 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SSX4O60224 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSX4O60224 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SSX4O60224 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSX4O60224 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SSX4O60224 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SSX4O60224 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSX4O60224 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSX4O60224 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.62■□□□□ 0.89
SSX4O60224 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.62■□□□□ 0.89
SSX4O60224 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSX4O60224 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SSX4O60224 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSX4O60224 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.62■□□□□ 0.89
SSX4O60224 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.62■□□□□ 0.89
SSX4O60224 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SSX4O60224 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.62■□□□□ 0.89
SSX4O60224 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSX4O60224 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SSX4O60224 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SSX4O60224 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSX4O60224 AP003733.4-201ENST00000623785 1697 ntBASIC20.61■□□□□ 0.89
SSX4O60224 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSX4O60224 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSX4O60224 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSX4O60224 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SSX4O60224 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SSX4O60224 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSX4O60224 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.6■□□□□ 0.89
SSX4O60224 MIR4508-201ENST00000584178 70 ntBASIC20.6■□□□□ 0.89
SSX4O60224 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SSX4O60224 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSX4O60224 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SSX4O60224 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSX4O60224 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.59■□□□□ 0.89
SSX4O60224 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSX4O60224 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.59■□□□□ 0.89
SSX4O60224 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSX4O60224 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SSX4O60224 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
SSX4O60224 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SSX4O60224 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SSX4O60224 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms