Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RNF13O43567 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF13O43567 AC004812.2-201ENST00000611079 2094 ntBASIC20.85■□□□□ 0.93
RNF13O43567 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF13O43567 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF13O43567 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF13O43567 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF13O43567 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF13O43567 TSPY13P-201ENST00000338964 914 ntBASIC20.84■□□□□ 0.93
RNF13O43567 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.84■□□□□ 0.93
RNF13O43567 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF13O43567 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF13O43567 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF13O43567 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF13O43567 AC079834.2-201ENST00000609776 1949 ntBASIC20.84■□□□□ 0.93
RNF13O43567 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF13O43567 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF13O43567 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.83■□□□□ 0.93
RNF13O43567 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF13O43567 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
RNF13O43567 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF13O43567 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF13O43567 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF13O43567 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF13O43567 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF13O43567 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF13O43567 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF13O43567 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RNF13O43567 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.82■□□□□ 0.92
RNF13O43567 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF13O43567 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RNF13O43567 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF13O43567 AC019171.1-201ENST00000601251 1056 ntBASIC20.82■□□□□ 0.92
RNF13O43567 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF13O43567 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF13O43567 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF13O43567 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF13O43567 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF13O43567 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.81■□□□□ 0.92
RNF13O43567 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RNF13O43567 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.81■□□□□ 0.92
RNF13O43567 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.81■□□□□ 0.92
RNF13O43567 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF13O43567 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF13O43567 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF13O43567 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RNF13O43567 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RNF13O43567 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.8■□□□□ 0.92
RNF13O43567 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF13O43567 AC012354.3-201ENST00000623734 483 ntBASIC20.8■□□□□ 0.92
RNF13O43567 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RNF13O43567 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF13O43567 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF13O43567 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF13O43567 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.79■□□□□ 0.92
RNF13O43567 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF13O43567 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF13O43567 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF13O43567 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF13O43567 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.79■□□□□ 0.92
RNF13O43567 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF13O43567 AC022616.5-201ENST00000518796 181 ntBASIC20.79■□□□□ 0.92
RNF13O43567 AC074183.2-201ENST00000623112 922 ntBASIC20.79■□□□□ 0.92
RNF13O43567 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF13O43567 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
RNF13O43567 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF13O43567 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF13O43567 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF13O43567 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF13O43567 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF13O43567 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF13O43567 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF13O43567 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF13O43567 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF13O43567 ABCB10P4-201ENST00000566803 2184 ntBASIC20.78■□□□□ 0.92
RNF13O43567 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.77■□□□□ 0.92
RNF13O43567 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.77■□□□□ 0.92
RNF13O43567 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF13O43567 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RNF13O43567 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF13O43567 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF13O43567 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RNF13O43567 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF13O43567 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF13O43567 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF13O43567 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF13O43567 AC011551.1-201ENST00000614101 683 ntBASIC20.76■□□□□ 0.91
RNF13O43567 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF13O43567 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF13O43567 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF13O43567 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF13O43567 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF13O43567 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF13O43567 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF13O43567 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.75■□□□□ 0.91
RNF13O43567 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF13O43567 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF13O43567 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RNF13O43567 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF13O43567 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms