Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.72■□□□□ 0.91
SMAD9O15198 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMAD9O15198 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.72■□□□□ 0.91
SMAD9O15198 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMAD9O15198 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMAD9O15198 AC021242.3-201ENST00000607598 1377 ntBASIC20.72■□□□□ 0.91
SMAD9O15198 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SMAD9O15198 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMAD9O15198 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMAD9O15198 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMAD9O15198 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMAD9O15198 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMAD9O15198 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMAD9O15198 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMAD9O15198 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMAD9O15198 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMAD9O15198 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMAD9O15198 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.7■□□□□ 0.9
SMAD9O15198 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMAD9O15198 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SMAD9O15198 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SMAD9O15198 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.7■□□□□ 0.9
SMAD9O15198 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMAD9O15198 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SMAD9O15198 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMAD9O15198 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMAD9O15198 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMAD9O15198 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMAD9O15198 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SMAD9O15198 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMAD9O15198 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.69■□□□□ 0.9
SMAD9O15198 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SMAD9O15198 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.69■□□□□ 0.9
SMAD9O15198 KRT125P-201ENST00000546827 989 ntBASIC20.69■□□□□ 0.9
SMAD9O15198 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.69■□□□□ 0.9
SMAD9O15198 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.69■□□□□ 0.9
SMAD9O15198 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMAD9O15198 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMAD9O15198 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMAD9O15198 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.69■□□□□ 0.9
SMAD9O15198 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.69■□□□□ 0.9
SMAD9O15198 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMAD9O15198 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.69■□□□□ 0.9
SMAD9O15198 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMAD9O15198 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD9O15198 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SMAD9O15198 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD9O15198 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.68■□□□□ 0.9
SMAD9O15198 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.68■□□□□ 0.9
SMAD9O15198 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.68■□□□□ 0.9
SMAD9O15198 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD9O15198 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD9O15198 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD9O15198 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD9O15198 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
SMAD9O15198 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD9O15198 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.68■□□□□ 0.9
SMAD9O15198 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.67■□□□□ 0.9
SMAD9O15198 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMAD9O15198 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMAD9O15198 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.67■□□□□ 0.9
SMAD9O15198 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.67■□□□□ 0.9
SMAD9O15198 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMAD9O15198 MIR4787-201ENST00000607364 84 ntBASIC20.67■□□□□ 0.9
SMAD9O15198 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.67■□□□□ 0.9
SMAD9O15198 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMAD9O15198 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMAD9O15198 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMAD9O15198 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMAD9O15198 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMAD9O15198 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.66■□□□□ 0.9
SMAD9O15198 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMAD9O15198 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.65■□□□□ 0.9
SMAD9O15198 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.65■□□□□ 0.9
SMAD9O15198 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMAD9O15198 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMAD9O15198 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMAD9O15198 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.65■□□□□ 0.9
SMAD9O15198 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMAD9O15198 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
SMAD9O15198 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMAD9O15198 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMAD9O15198 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMAD9O15198 AL139125.2-201ENST00000623134 1869 ntBASIC20.64■□□□□ 0.9
SMAD9O15198 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
SMAD9O15198 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMAD9O15198 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMAD9O15198 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.64■□□□□ 0.89
SMAD9O15198 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.64■□□□□ 0.89
SMAD9O15198 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMAD9O15198 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.64■□□□□ 0.89
SMAD9O15198 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SMAD9O15198 AC131274.2-201ENST00000580697 1507 ntBASIC20.63■□□□□ 0.89
SMAD9O15198 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMAD9O15198 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMAD9O15198 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMAD9O15198 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.63■□□□□ 0.89
SMAD9O15198 GUSBP5-201ENST00000418136 578 ntBASIC20.63■□□□□ 0.89
SMAD9O15198 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SMAD9O15198 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms