Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 RARRES2P2-201ENST00000394842 485 ntBASIC22.39■■□□□ 1.17
UBFD1O14562 AL592295.1-201ENST00000400984 884 ntBASIC22.39■■□□□ 1.17
UBFD1O14562 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.39■■□□□ 1.17
UBFD1O14562 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.39■■□□□ 1.17
UBFD1O14562 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.39■■□□□ 1.17
UBFD1O14562 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.38■■□□□ 1.17
UBFD1O14562 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
UBFD1O14562 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.38■■□□□ 1.17
UBFD1O14562 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
UBFD1O14562 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.38■■□□□ 1.17
UBFD1O14562 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
UBFD1O14562 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
UBFD1O14562 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.37■■□□□ 1.17
UBFD1O14562 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
UBFD1O14562 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
UBFD1O14562 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
UBFD1O14562 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
UBFD1O14562 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
UBFD1O14562 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
UBFD1O14562 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
UBFD1O14562 LONRF2P2-201ENST00000439212 571 ntBASIC22.36■■□□□ 1.17
UBFD1O14562 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
UBFD1O14562 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
UBFD1O14562 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.36■■□□□ 1.17
UBFD1O14562 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.36■■□□□ 1.17
UBFD1O14562 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
UBFD1O14562 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.36■■□□□ 1.17
UBFD1O14562 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
UBFD1O14562 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.36■■□□□ 1.17
UBFD1O14562 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
UBFD1O14562 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
UBFD1O14562 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
UBFD1O14562 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
UBFD1O14562 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.35■■□□□ 1.17
UBFD1O14562 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.35■■□□□ 1.17
UBFD1O14562 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
UBFD1O14562 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.35■■□□□ 1.17
UBFD1O14562 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
UBFD1O14562 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
UBFD1O14562 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.34■■□□□ 1.17
UBFD1O14562 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.34■■□□□ 1.17
UBFD1O14562 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
UBFD1O14562 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
UBFD1O14562 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.34■■□□□ 1.17
UBFD1O14562 AC129492.7-201ENST00000622992 756 ntBASIC22.34■■□□□ 1.17
UBFD1O14562 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.34■■□□□ 1.17
UBFD1O14562 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
UBFD1O14562 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.33■■□□□ 1.17
UBFD1O14562 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
UBFD1O14562 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
UBFD1O14562 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
UBFD1O14562 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
UBFD1O14562 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
UBFD1O14562 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
UBFD1O14562 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
UBFD1O14562 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
UBFD1O14562 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.32■■□□□ 1.16
UBFD1O14562 KRT18P60-201ENST00000312876 1297 ntBASIC22.32■■□□□ 1.16
UBFD1O14562 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
UBFD1O14562 HSD17B1P1-201ENST00000590052 955 ntBASIC22.32■■□□□ 1.16
UBFD1O14562 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
UBFD1O14562 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
UBFD1O14562 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
UBFD1O14562 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
UBFD1O14562 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.31■■□□□ 1.16
UBFD1O14562 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.31■■□□□ 1.16
UBFD1O14562 ANOS2P-203ENST00000472227 1816 ntBASIC22.31■■□□□ 1.16
UBFD1O14562 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
UBFD1O14562 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
UBFD1O14562 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
UBFD1O14562 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
UBFD1O14562 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.31■■□□□ 1.16
UBFD1O14562 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.31■■□□□ 1.16
UBFD1O14562 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
UBFD1O14562 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
UBFD1O14562 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
UBFD1O14562 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
UBFD1O14562 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
UBFD1O14562 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
UBFD1O14562 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
UBFD1O14562 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
UBFD1O14562 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
UBFD1O14562 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
UBFD1O14562 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
UBFD1O14562 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
UBFD1O14562 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.3■■□□□ 1.16
UBFD1O14562 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
UBFD1O14562 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
UBFD1O14562 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
UBFD1O14562 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
UBFD1O14562 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
UBFD1O14562 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
UBFD1O14562 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
UBFD1O14562 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
UBFD1O14562 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
UBFD1O14562 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.29■■□□□ 1.16
UBFD1O14562 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.29■■□□□ 1.16
UBFD1O14562 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
UBFD1O14562 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.28■■□□□ 1.16
UBFD1O14562 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms