Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SRRM4A7MD48 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
SRRM4A7MD48 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SRRM4A7MD48 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRRM4A7MD48 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SRRM4A7MD48 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SRRM4A7MD48 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SRRM4A7MD48 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SRRM4A7MD48 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.51■□□□□ 0.55
SRRM4A7MD48 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRRM4A7MD48 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SRRM4A7MD48 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.51■□□□□ 0.55
SRRM4A7MD48 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRRM4A7MD48 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SRRM4A7MD48 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRRM4A7MD48 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SRRM4A7MD48 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRRM4A7MD48 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRRM4A7MD48 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.5■□□□□ 0.55
SRRM4A7MD48 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRRM4A7MD48 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRRM4A7MD48 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SRRM4A7MD48 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRRM4A7MD48 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRRM4A7MD48 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRRM4A7MD48 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRRM4A7MD48 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRRM4A7MD48 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRRM4A7MD48 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
SRRM4A7MD48 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SRRM4A7MD48 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.49■□□□□ 0.55
SRRM4A7MD48 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.49■□□□□ 0.55
SRRM4A7MD48 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.49■□□□□ 0.55
SRRM4A7MD48 AC010980.1-201ENST00000587192 1142 ntBASIC18.49■□□□□ 0.55
SRRM4A7MD48 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.49■□□□□ 0.55
SRRM4A7MD48 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRRM4A7MD48 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.49■□□□□ 0.55
SRRM4A7MD48 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRRM4A7MD48 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRRM4A7MD48 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SRRM4A7MD48 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SRRM4A7MD48 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SRRM4A7MD48 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRRM4A7MD48 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRRM4A7MD48 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.48■□□□□ 0.55
SRRM4A7MD48 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.48■□□□□ 0.55
SRRM4A7MD48 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.48■□□□□ 0.55
SRRM4A7MD48 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SRRM4A7MD48 AC074183.2-201ENST00000623112 922 ntBASIC18.48■□□□□ 0.55
SRRM4A7MD48 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.48■□□□□ 0.55
SRRM4A7MD48 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRRM4A7MD48 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRRM4A7MD48 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRRM4A7MD48 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SRRM4A7MD48 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.48■□□□□ 0.55
SRRM4A7MD48 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SRRM4A7MD48 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SRRM4A7MD48 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SRRM4A7MD48 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SRRM4A7MD48 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SRRM4A7MD48 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
SRRM4A7MD48 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SRRM4A7MD48 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.47■□□□□ 0.55
SRRM4A7MD48 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SRRM4A7MD48 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SRRM4A7MD48 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.46■□□□□ 0.55
SRRM4A7MD48 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.46■□□□□ 0.55
SRRM4A7MD48 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.46■□□□□ 0.55
SRRM4A7MD48 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.46■□□□□ 0.55
SRRM4A7MD48 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SRRM4A7MD48 AC120024.1-201ENST00000562672 995 ntBASIC18.46■□□□□ 0.55
SRRM4A7MD48 AC012354.3-201ENST00000623734 483 ntBASIC18.46■□□□□ 0.55
SRRM4A7MD48 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SRRM4A7MD48 AL161729.1-201ENST00000604104 1402 ntBASIC18.46■□□□□ 0.55
SRRM4A7MD48 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SRRM4A7MD48 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SRRM4A7MD48 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SRRM4A7MD48 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SRRM4A7MD48 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SRRM4A7MD48 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.46■□□□□ 0.55
SRRM4A7MD48 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SRRM4A7MD48 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SRRM4A7MD48 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SRRM4A7MD48 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.45■□□□□ 0.54
SRRM4A7MD48 AL033527.3-201ENST00000566366 1196 ntBASIC18.45■□□□□ 0.54
SRRM4A7MD48 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.45■□□□□ 0.54
SRRM4A7MD48 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.45■□□□□ 0.54
SRRM4A7MD48 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.45■□□□□ 0.54
SRRM4A7MD48 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SRRM4A7MD48 AL022069.1-201ENST00000568025 1636 ntBASIC18.45■□□□□ 0.54
SRRM4A7MD48 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SRRM4A7MD48 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SRRM4A7MD48 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SRRM4A7MD48 DUSP8P5-201ENST00000422884 1815 ntBASIC18.44■□□□□ 0.54
SRRM4A7MD48 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SRRM4A7MD48 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SRRM4A7MD48 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SRRM4A7MD48 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.44■□□□□ 0.54
SRRM4A7MD48 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SRRM4A7MD48 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms