Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF103-CHMP3A0A140T963 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF103-CHMP3A0A140T963 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF103-CHMP3A0A140T963 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF103-CHMP3A0A140T963 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF103-CHMP3A0A140T963 AL592293.1-201ENST00000502889 1188 ntBASIC22■■□□□ 1.11
RNF103-CHMP3A0A140T963 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF103-CHMP3A0A140T963 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
RNF103-CHMP3A0A140T963 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
RNF103-CHMP3A0A140T963 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22■■□□□ 1.11
RNF103-CHMP3A0A140T963 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF103-CHMP3A0A140T963 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF103-CHMP3A0A140T963 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF103-CHMP3A0A140T963 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF103-CHMP3A0A140T963 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
RNF103-CHMP3A0A140T963 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF103-CHMP3A0A140T963 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.99■■□□□ 1.11
RNF103-CHMP3A0A140T963 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF103-CHMP3A0A140T963 C9orf163-202ENST00000624034 2573 ntBASIC21.99■■□□□ 1.11
RNF103-CHMP3A0A140T963 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF103-CHMP3A0A140T963 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF103-CHMP3A0A140T963 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF103-CHMP3A0A140T963 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RNF103-CHMP3A0A140T963 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF103-CHMP3A0A140T963 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF103-CHMP3A0A140T963 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RNF103-CHMP3A0A140T963 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
RNF103-CHMP3A0A140T963 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF103-CHMP3A0A140T963 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF103-CHMP3A0A140T963 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF103-CHMP3A0A140T963 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
RNF103-CHMP3A0A140T963 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF103-CHMP3A0A140T963 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF103-CHMP3A0A140T963 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.97■■□□□ 1.11
RNF103-CHMP3A0A140T963 RARRES2P2-201ENST00000394842 485 ntBASIC21.97■■□□□ 1.11
RNF103-CHMP3A0A140T963 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF103-CHMP3A0A140T963 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNF103-CHMP3A0A140T963 AC018755.3-202ENST00000596210 929 ntBASIC21.97■■□□□ 1.11
RNF103-CHMP3A0A140T963 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
RNF103-CHMP3A0A140T963 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNF103-CHMP3A0A140T963 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF103-CHMP3A0A140T963 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF103-CHMP3A0A140T963 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF103-CHMP3A0A140T963 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.96■■□□□ 1.11
RNF103-CHMP3A0A140T963 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF103-CHMP3A0A140T963 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNF103-CHMP3A0A140T963 SPCS2P3-201ENST00000500401 656 ntBASIC21.96■■□□□ 1.11
RNF103-CHMP3A0A140T963 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF103-CHMP3A0A140T963 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.96■■□□□ 1.11
RNF103-CHMP3A0A140T963 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
RNF103-CHMP3A0A140T963 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.96■■□□□ 1.11
RNF103-CHMP3A0A140T963 ABCB10P4-201ENST00000566803 2184 ntBASIC21.96■■□□□ 1.11
RNF103-CHMP3A0A140T963 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF103-CHMP3A0A140T963 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
RNF103-CHMP3A0A140T963 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.95■■□□□ 1.1
RNF103-CHMP3A0A140T963 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RNF103-CHMP3A0A140T963 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF103-CHMP3A0A140T963 HSD17B1P1-201ENST00000590052 955 ntBASIC21.95■■□□□ 1.1
RNF103-CHMP3A0A140T963 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF103-CHMP3A0A140T963 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF103-CHMP3A0A140T963 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
RNF103-CHMP3A0A140T963 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RNF103-CHMP3A0A140T963 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF103-CHMP3A0A140T963 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF103-CHMP3A0A140T963 RPS2P7-201ENST00000447334 885 ntBASIC21.94■■□□□ 1.1
RNF103-CHMP3A0A140T963 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF103-CHMP3A0A140T963 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.94■■□□□ 1.1
RNF103-CHMP3A0A140T963 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF103-CHMP3A0A140T963 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF103-CHMP3A0A140T963 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF103-CHMP3A0A140T963 HLA-L-211ENST00000482052 1765 ntBASIC21.94■■□□□ 1.1
RNF103-CHMP3A0A140T963 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF103-CHMP3A0A140T963 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF103-CHMP3A0A140T963 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF103-CHMP3A0A140T963 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.94■■□□□ 1.1
RNF103-CHMP3A0A140T963 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF103-CHMP3A0A140T963 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF103-CHMP3A0A140T963 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF103-CHMP3A0A140T963 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
RNF103-CHMP3A0A140T963 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF103-CHMP3A0A140T963 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
RNF103-CHMP3A0A140T963 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF103-CHMP3A0A140T963 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
RNF103-CHMP3A0A140T963 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF103-CHMP3A0A140T963 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF103-CHMP3A0A140T963 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.92■■□□□ 1.1
RNF103-CHMP3A0A140T963 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RNF103-CHMP3A0A140T963 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF103-CHMP3A0A140T963 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF103-CHMP3A0A140T963 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.92■■□□□ 1.1
RNF103-CHMP3A0A140T963 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
RNF103-CHMP3A0A140T963 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RNF103-CHMP3A0A140T963 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.92■■□□□ 1.1
RNF103-CHMP3A0A140T963 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF103-CHMP3A0A140T963 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
RNF103-CHMP3A0A140T963 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
RNF103-CHMP3A0A140T963 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF103-CHMP3A0A140T963 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF103-CHMP3A0A140T963 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF103-CHMP3A0A140T963 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms