Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV21A0A0B4J279 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV21A0A0B4J279 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRAV21A0A0B4J279 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV21A0A0B4J279 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRAV21A0A0B4J279 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV21A0A0B4J279 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV21A0A0B4J279 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRAV21A0A0B4J279 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV21A0A0B4J279 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV21A0A0B4J279 AC009831.1-201ENST00000580420 1582 ntBASIC17.04■□□□□ 0.32
TRAV21A0A0B4J279 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRAV21A0A0B4J279 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV21A0A0B4J279 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV21A0A0B4J279 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV21A0A0B4J279 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV21A0A0B4J279 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV21A0A0B4J279 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV21A0A0B4J279 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV21A0A0B4J279 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
TRAV21A0A0B4J279 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAV21A0A0B4J279 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV21A0A0B4J279 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV21A0A0B4J279 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TRAV21A0A0B4J279 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17.03■□□□□ 0.32
TRAV21A0A0B4J279 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.03■□□□□ 0.32
TRAV21A0A0B4J279 AC018755.3-202ENST00000596210 929 ntBASIC17.03■□□□□ 0.32
TRAV21A0A0B4J279 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TRAV21A0A0B4J279 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV21A0A0B4J279 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV21A0A0B4J279 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV21A0A0B4J279 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV21A0A0B4J279 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV21A0A0B4J279 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV21A0A0B4J279 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV21A0A0B4J279 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAV21A0A0B4J279 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.02■□□□□ 0.32
TRAV21A0A0B4J279 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
TRAV21A0A0B4J279 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV21A0A0B4J279 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV21A0A0B4J279 RPS2P7-201ENST00000447334 885 ntBASIC17.02■□□□□ 0.32
TRAV21A0A0B4J279 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV21A0A0B4J279 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
TRAV21A0A0B4J279 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAV21A0A0B4J279 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV21A0A0B4J279 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV21A0A0B4J279 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV21A0A0B4J279 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
TRAV21A0A0B4J279 AL161729.1-201ENST00000604104 1402 ntBASIC17.02■□□□□ 0.31
TRAV21A0A0B4J279 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV21A0A0B4J279 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.02■□□□□ 0.31
TRAV21A0A0B4J279 AC090877.2-201ENST00000558441 1738 ntBASIC17.01■□□□□ 0.31
TRAV21A0A0B4J279 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV21A0A0B4J279 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV21A0A0B4J279 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV21A0A0B4J279 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV21A0A0B4J279 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAV21A0A0B4J279 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TRAV21A0A0B4J279 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV21A0A0B4J279 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV21A0A0B4J279 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV21A0A0B4J279 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV21A0A0B4J279 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV21A0A0B4J279 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV21A0A0B4J279 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRAV21A0A0B4J279 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17■□□□□ 0.31
TRAV21A0A0B4J279 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV21A0A0B4J279 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV21A0A0B4J279 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17■□□□□ 0.31
TRAV21A0A0B4J279 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRAV21A0A0B4J279 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV21A0A0B4J279 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV21A0A0B4J279 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
TRAV21A0A0B4J279 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV21A0A0B4J279 AL592295.1-201ENST00000400984 884 ntBASIC16.99■□□□□ 0.31
TRAV21A0A0B4J279 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAV21A0A0B4J279 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRAV21A0A0B4J279 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TRAV21A0A0B4J279 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV21A0A0B4J279 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV21A0A0B4J279 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV21A0A0B4J279 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV21A0A0B4J279 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRAV21A0A0B4J279 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV21A0A0B4J279 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV21A0A0B4J279 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC16.98■□□□□ 0.31
TRAV21A0A0B4J279 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC16.98■□□□□ 0.31
TRAV21A0A0B4J279 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV21A0A0B4J279 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV21A0A0B4J279 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV21A0A0B4J279 RNF126P1-201ENST00000567452 1320 ntBASIC16.97■□□□□ 0.31
TRAV21A0A0B4J279 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV21A0A0B4J279 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
TRAV21A0A0B4J279 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV21A0A0B4J279 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV21A0A0B4J279 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV21A0A0B4J279 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV21A0A0B4J279 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV21A0A0B4J279 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRAV21A0A0B4J279 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms