Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV17A0A0B4J275 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.96■□□□□ 0.95
TRAV17A0A0B4J275 AL031432.3-201ENST00000607698 485 ntBASIC20.96■□□□□ 0.95
TRAV17A0A0B4J275 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV17A0A0B4J275 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TRAV17A0A0B4J275 SYT6-210ENST00000641643 1587 ntBASIC20.96■□□□□ 0.95
TRAV17A0A0B4J275 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.96■□□□□ 0.95
TRAV17A0A0B4J275 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV17A0A0B4J275 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.96■□□□□ 0.95
TRAV17A0A0B4J275 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.95■□□□□ 0.95
TRAV17A0A0B4J275 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV17A0A0B4J275 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV17A0A0B4J275 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.95■□□□□ 0.94
TRAV17A0A0B4J275 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV17A0A0B4J275 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV17A0A0B4J275 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV17A0A0B4J275 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.95■□□□□ 0.94
TRAV17A0A0B4J275 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV17A0A0B4J275 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.95■□□□□ 0.94
TRAV17A0A0B4J275 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.95■□□□□ 0.94
TRAV17A0A0B4J275 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.94■□□□□ 0.94
TRAV17A0A0B4J275 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.94■□□□□ 0.94
TRAV17A0A0B4J275 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.94■□□□□ 0.94
TRAV17A0A0B4J275 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.94■□□□□ 0.94
TRAV17A0A0B4J275 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.94■□□□□ 0.94
TRAV17A0A0B4J275 ZNRF2P3-201ENST00000424200 374 ntBASIC20.94■□□□□ 0.94
TRAV17A0A0B4J275 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.94■□□□□ 0.94
TRAV17A0A0B4J275 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV17A0A0B4J275 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV17A0A0B4J275 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV17A0A0B4J275 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV17A0A0B4J275 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV17A0A0B4J275 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV17A0A0B4J275 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TRAV17A0A0B4J275 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
TRAV17A0A0B4J275 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TRAV17A0A0B4J275 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.93■□□□□ 0.94
TRAV17A0A0B4J275 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV17A0A0B4J275 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV17A0A0B4J275 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV17A0A0B4J275 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV17A0A0B4J275 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TRAV17A0A0B4J275 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV17A0A0B4J275 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.92■□□□□ 0.94
TRAV17A0A0B4J275 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.92■□□□□ 0.94
TRAV17A0A0B4J275 AC145676.1-201ENST00000514988 2004 ntBASIC20.92■□□□□ 0.94
TRAV17A0A0B4J275 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV17A0A0B4J275 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
TRAV17A0A0B4J275 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV17A0A0B4J275 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV17A0A0B4J275 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV17A0A0B4J275 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TRAV17A0A0B4J275 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TRAV17A0A0B4J275 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV17A0A0B4J275 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TRAV17A0A0B4J275 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.91■□□□□ 0.94
TRAV17A0A0B4J275 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV17A0A0B4J275 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TRAV17A0A0B4J275 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TRAV17A0A0B4J275 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TRAV17A0A0B4J275 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.9■□□□□ 0.94
TRAV17A0A0B4J275 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV17A0A0B4J275 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.9■□□□□ 0.94
TRAV17A0A0B4J275 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRAV17A0A0B4J275 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV17A0A0B4J275 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV17A0A0B4J275 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TRAV17A0A0B4J275 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV17A0A0B4J275 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV17A0A0B4J275 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV17A0A0B4J275 AF213884.3-201ENST00000563833 479 ntBASIC20.89■□□□□ 0.93
TRAV17A0A0B4J275 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.89■□□□□ 0.93
TRAV17A0A0B4J275 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV17A0A0B4J275 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.88■□□□□ 0.93
TRAV17A0A0B4J275 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV17A0A0B4J275 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV17A0A0B4J275 AC091060.1-201ENST00000623524 1766 ntBASIC20.88■□□□□ 0.93
TRAV17A0A0B4J275 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV17A0A0B4J275 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV17A0A0B4J275 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV17A0A0B4J275 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TRAV17A0A0B4J275 AC009102.2-201ENST00000606772 1639 ntBASIC20.87■□□□□ 0.93
TRAV17A0A0B4J275 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV17A0A0B4J275 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV17A0A0B4J275 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.87■□□□□ 0.93
TRAV17A0A0B4J275 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.87■□□□□ 0.93
TRAV17A0A0B4J275 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.87■□□□□ 0.93
TRAV17A0A0B4J275 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TRAV17A0A0B4J275 AC099791.2-201ENST00000605725 427 ntBASIC20.87■□□□□ 0.93
TRAV17A0A0B4J275 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.87■□□□□ 0.93
TRAV17A0A0B4J275 AL136967.2-201ENST00000623968 743 ntBASIC20.87■□□□□ 0.93
TRAV17A0A0B4J275 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.87■□□□□ 0.93
TRAV17A0A0B4J275 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.87■□□□□ 0.93
TRAV17A0A0B4J275 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
TRAV17A0A0B4J275 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV17A0A0B4J275 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV17A0A0B4J275 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
TRAV17A0A0B4J275 AL161729.1-201ENST00000604104 1402 ntBASIC20.87■□□□□ 0.93
TRAV17A0A0B4J275 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV17A0A0B4J275 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms