Protein–RNA interactions for Protein: A0A075B6U4

TRAV7, T-cell receptor alpha variable 7 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV7A0A075B6U4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV7A0A075B6U4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV7A0A075B6U4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV7A0A075B6U4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV7A0A075B6U4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
TRAV7A0A075B6U4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRAV7A0A075B6U4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC13.7□□□□□ -0.22
TRAV7A0A075B6U4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
TRAV7A0A075B6U4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV7A0A075B6U4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRAV7A0A075B6U4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TRAV7A0A075B6U4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC13.7□□□□□ -0.22
TRAV7A0A075B6U4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
TRAV7A0A075B6U4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV7A0A075B6U4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV7A0A075B6U4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV7A0A075B6U4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV7A0A075B6U4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV7A0A075B6U4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRAV7A0A075B6U4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV7A0A075B6U4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV7A0A075B6U4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV7A0A075B6U4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV7A0A075B6U4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV7A0A075B6U4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV7A0A075B6U4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
TRAV7A0A075B6U4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV7A0A075B6U4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV7A0A075B6U4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV7A0A075B6U4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAV7A0A075B6U4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRAV7A0A075B6U4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV7A0A075B6U4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV7A0A075B6U4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV7A0A075B6U4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV7A0A075B6U4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV7A0A075B6U4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV7A0A075B6U4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV7A0A075B6U4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV7A0A075B6U4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAV7A0A075B6U4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV7A0A075B6U4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV7A0A075B6U4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV7A0A075B6U4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV7A0A075B6U4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TRAV7A0A075B6U4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV7A0A075B6U4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV7A0A075B6U4 AC004812.2-201ENST00000611079 2094 ntBASIC13.67□□□□□ -0.22
TRAV7A0A075B6U4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV7A0A075B6U4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV7A0A075B6U4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV7A0A075B6U4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRAV7A0A075B6U4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV7A0A075B6U4 AC007952.6-201ENST00000573168 2673 ntBASIC13.67□□□□□ -0.22
TRAV7A0A075B6U4 AC003957.1-201ENST00000625108 2673 ntBASIC13.67□□□□□ -0.22
TRAV7A0A075B6U4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV7A0A075B6U4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV7A0A075B6U4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV7A0A075B6U4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV7A0A075B6U4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
TRAV7A0A075B6U4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV7A0A075B6U4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
TRAV7A0A075B6U4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV7A0A075B6U4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TRAV7A0A075B6U4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV7A0A075B6U4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV7A0A075B6U4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV7A0A075B6U4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV7A0A075B6U4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV7A0A075B6U4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV7A0A075B6U4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV7A0A075B6U4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV7A0A075B6U4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV7A0A075B6U4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV7A0A075B6U4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRAV7A0A075B6U4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV7A0A075B6U4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV7A0A075B6U4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV7A0A075B6U4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAV7A0A075B6U4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV7A0A075B6U4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV7A0A075B6U4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRAV7A0A075B6U4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV7A0A075B6U4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV7A0A075B6U4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV7A0A075B6U4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV7A0A075B6U4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAV7A0A075B6U4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV7A0A075B6U4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRAV7A0A075B6U4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV7A0A075B6U4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV7A0A075B6U4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV7A0A075B6U4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV7A0A075B6U4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV7A0A075B6U4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRAV7A0A075B6U4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
TRAV7A0A075B6U4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV7A0A075B6U4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV7A0A075B6U4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV7A0A075B6U4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms