Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 FNTAP2-201ENST00000430308 634 ntBASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 AC106872.11-201ENST00000605838 421 ntBASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 KRT8P4-201ENST00000509735 1454 ntBASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 AP003171.2-201ENST00000528208 925 ntBASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1G3Q9Y6M4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CSNK1G3Q9Y6M4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CSNK1G3Q9Y6M4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSNK1G3Q9Y6M4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms