Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 SALL4P5-201ENST00000419001 1760 ntBASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 RN7SKP230-201ENST00000365642 335 ntBASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 CR383656.12-201ENST00000549567 513 ntBASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 BTNL10-201ENST00000595971 695 ntBASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 LINC02084-201ENST00000606069 1096 ntBASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 AP003400.6-201ENST00000624698 740 ntBASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 AC068587.6-202ENST00000641839 5619 ntBASIC15.91■□□□□ 0.14
PCDHGC3Q9UN70 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 AC005225.4-201ENST00000557330 545 ntBASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 AC138696.2-201ENST00000607376 223 ntBASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 AL022328.1-201ENST00000610050 478 ntBASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGC3Q9UN70 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms