Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 AZGP1P1-201ENST00000411909 902 ntBASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 FGFR3P6-201ENST00000457012 610 ntBASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 AC098859.1-201ENST00000502915 1238 ntBASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 AC136632.2-201ENST00000512891 861 ntBASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 AL355877.3-201ENST00000622820 899 ntBASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 AC004790.2-201ENST00000623588 572 ntBASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 FOXO1B-201ENST00000504678 1527 ntBASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX1-2Q9UD57 AC125807.2-201ENST00000513358 3514 ntBASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 RN7SL832P-201ENST00000607781 1756 ntBASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 NCLP1-201ENST00000445357 1963 ntBASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 AL157996.1-201ENST00000624684 2299 ntBASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NKX1-2Q9UD57 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX1-2Q9UD57 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NKX1-2Q9UD57 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NKX1-2Q9UD57 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NKX1-2Q9UD57 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.37□□□□□ -0.11
NKX1-2Q9UD57 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC14.37□□□□□ -0.11
NKX1-2Q9UD57 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NKX1-2Q9UD57 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX1-2Q9UD57 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX1-2Q9UD57 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.37□□□□□ -0.11
NKX1-2Q9UD57 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.37□□□□□ -0.11
NKX1-2Q9UD57 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NKX1-2Q9UD57 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX1-2Q9UD57 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.37□□□□□ -0.11
NKX1-2Q9UD57 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC14.37□□□□□ -0.11
NKX1-2Q9UD57 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.37□□□□□ -0.11
NKX1-2Q9UD57 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.37□□□□□ -0.11
NKX1-2Q9UD57 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX1-2Q9UD57 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
NKX1-2Q9UD57 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
NKX1-2Q9UD57 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX1-2Q9UD57 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms