Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 BTBD6P1-201ENST00000412176 1267 ntBASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 AC007969.1-201ENST00000433675 447 ntBASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 ECM1P1-201ENST00000604092 1279 ntBASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
HDAC6Q9UBN7 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 HOMER2P2-201ENST00000451621 847 ntBASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 AL591846.1-201ENST00000451736 433 ntBASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 AC068587.10-201ENST00000641210 219 ntBASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
HDAC6Q9UBN7 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms