Protein–RNA interactions for Protein: Q9NVI7

ATAD3A, ATPase family AAA domain-containing protein 3A, humanhuman

Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3AQ9NVI7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 AL139400.1-201ENST00000366220 510 ntBASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 FAM86GP-201ENST00000448322 971 ntBASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 AC004461.2-201ENST00000629517 803 ntBASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATAD3AQ9NVI7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 REXO1L4P-201ENST00000605109 1937 ntBASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 AC000095.1-201ENST00000603208 874 ntBASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 AC073869.1-201ENST00000415574 2762 ntBASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATAD3AQ9NVI7 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
ATAD3AQ9NVI7 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATAD3AQ9NVI7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ATAD3AQ9NVI7 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATAD3AQ9NVI7 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
ATAD3AQ9NVI7 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATAD3AQ9NVI7 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATAD3AQ9NVI7 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
ATAD3AQ9NVI7 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATAD3AQ9NVI7 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ATAD3AQ9NVI7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 297 ms