Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.44■□□□□ 0.22
TRMT13Q9NUP7 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRMT13Q9NUP7 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRMT13Q9NUP7 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.44■□□□□ 0.22
TRMT13Q9NUP7 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
TRMT13Q9NUP7 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.44■□□□□ 0.22
TRMT13Q9NUP7 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.44■□□□□ 0.22
TRMT13Q9NUP7 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRMT13Q9NUP7 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.44■□□□□ 0.22
TRMT13Q9NUP7 MIR6720-201ENST00000611664 98 ntBASIC16.44■□□□□ 0.22
TRMT13Q9NUP7 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRMT13Q9NUP7 RN7SL736P-201ENST00000613111 269 ntBASIC16.44■□□□□ 0.22
TRMT13Q9NUP7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRMT13Q9NUP7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TRMT13Q9NUP7 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRMT13Q9NUP7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRMT13Q9NUP7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRMT13Q9NUP7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRMT13Q9NUP7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRMT13Q9NUP7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRMT13Q9NUP7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRMT13Q9NUP7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRMT13Q9NUP7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 PCDHB19P-201ENST00000570871 2371 ntBASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 AC239868.1-201ENST00000369385 493 ntBASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 OR2K2-202ENST00000374428 1038 ntBASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 POU5F1P2-201ENST00000521750 823 ntBASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 NPM1P43-201ENST00000558669 786 ntBASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 AC009884.2-201ENST00000603110 324 ntBASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRMT13Q9NUP7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 KRT8P21-201ENST00000430398 1491 ntBASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 AL627231.1-201ENST00000394467 1125 ntBASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 AC078875.1-201ENST00000431907 724 ntBASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 HYMAI-201ENST00000635591 3347 ntBASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRMT13Q9NUP7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms