Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 PIN1P1-201ENST00000412108 996 ntBASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 RN7SL692P-201ENST00000464677 288 ntBASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 AC026979.3-201ENST00000607315 403 ntBASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 AC007787.1-201ENST00000588095 1583 ntBASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 AC107918.4-201ENST00000641966 3141 ntBASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCM2LQ9NUG4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCM2LQ9NUG4 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.46□□□□□ -0.1
CCM2LQ9NUG4 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CCM2LQ9NUG4 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.46□□□□□ -0.1
CCM2LQ9NUG4 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.46□□□□□ -0.1
CCM2LQ9NUG4 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCM2LQ9NUG4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.46□□□□□ -0.1
CCM2LQ9NUG4 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.46□□□□□ -0.1
CCM2LQ9NUG4 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.46□□□□□ -0.1
CCM2LQ9NUG4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 AC104457.1-201ENST00000401024 814 ntBASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 ATP5G2P4-201ENST00000442175 420 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms