Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ELL3Q9HB65 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ELL3Q9HB65 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ELL3Q9HB65 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ELL3Q9HB65 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
ELL3Q9HB65 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.31□□□□□ -0.28
ELL3Q9HB65 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ELL3Q9HB65 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ELL3Q9HB65 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ELL3Q9HB65 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ELL3Q9HB65 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.31□□□□□ -0.28
ELL3Q9HB65 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ELL3Q9HB65 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ELL3Q9HB65 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
ELL3Q9HB65 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ELL3Q9HB65 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.31□□□□□ -0.28
ELL3Q9HB65 TARDBPP1-201ENST00000442013 1203 ntBASIC13.31□□□□□ -0.28
ELL3Q9HB65 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.31□□□□□ -0.28
ELL3Q9HB65 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ELL3Q9HB65 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.31□□□□□ -0.28
ELL3Q9HB65 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.31□□□□□ -0.28
ELL3Q9HB65 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ELL3Q9HB65 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.31□□□□□ -0.28
ELL3Q9HB65 IGHV3-42-201ENST00000520410 361 ntBASIC13.31□□□□□ -0.28
ELL3Q9HB65 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ELL3Q9HB65 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.31□□□□□ -0.28
ELL3Q9HB65 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.31□□□□□ -0.28
ELL3Q9HB65 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ELL3Q9HB65 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.31□□□□□ -0.28
ELL3Q9HB65 AC051619.7-201ENST00000568314 623 ntBASIC13.31□□□□□ -0.28
ELL3Q9HB65 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.31□□□□□ -0.28
ELL3Q9HB65 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ELL3Q9HB65 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.31□□□□□ -0.28
ELL3Q9HB65 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ELL3Q9HB65 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
ELL3Q9HB65 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
ELL3Q9HB65 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ELL3Q9HB65 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ELL3Q9HB65 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.31□□□□□ -0.28
ELL3Q9HB65 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ELL3Q9HB65 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.31□□□□□ -0.28
ELL3Q9HB65 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.31□□□□□ -0.28
ELL3Q9HB65 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ELL3Q9HB65 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.31□□□□□ -0.28
ELL3Q9HB65 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ELL3Q9HB65 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ELL3Q9HB65 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.31□□□□□ -0.28
ELL3Q9HB65 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.31□□□□□ -0.28
ELL3Q9HB65 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ELL3Q9HB65 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ELL3Q9HB65 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.31□□□□□ -0.28
ELL3Q9HB65 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ELL3Q9HB65 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ELL3Q9HB65 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ELL3Q9HB65 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ELL3Q9HB65 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ELL3Q9HB65 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ELL3Q9HB65 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ELL3Q9HB65 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.3□□□□□ -0.28
ELL3Q9HB65 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.3□□□□□ -0.28
ELL3Q9HB65 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.3□□□□□ -0.28
ELL3Q9HB65 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.3□□□□□ -0.28
ELL3Q9HB65 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
ELL3Q9HB65 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ELL3Q9HB65 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.3□□□□□ -0.28
ELL3Q9HB65 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ELL3Q9HB65 CETN4P-206ENST00000642099 2168 ntBASIC13.3□□□□□ -0.28
ELL3Q9HB65 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
ELL3Q9HB65 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ELL3Q9HB65 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ELL3Q9HB65 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ELL3Q9HB65 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ELL3Q9HB65 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.3□□□□□ -0.28
ELL3Q9HB65 MIR943-201ENST00000401286 94 ntBASIC13.3□□□□□ -0.28
ELL3Q9HB65 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
ELL3Q9HB65 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ELL3Q9HB65 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ELL3Q9HB65 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ELL3Q9HB65 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.3□□□□□ -0.28
ELL3Q9HB65 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.3□□□□□ -0.28
ELL3Q9HB65 AC069120.2-201ENST00000524091 540 ntBASIC13.3□□□□□ -0.28
ELL3Q9HB65 AL079307.3-201ENST00000556114 283 ntBASIC13.3□□□□□ -0.28
ELL3Q9HB65 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.3□□□□□ -0.28
ELL3Q9HB65 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.3□□□□□ -0.28
ELL3Q9HB65 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ELL3Q9HB65 MIR6069-201ENST00000620069 79 ntBASIC13.3□□□□□ -0.28
ELL3Q9HB65 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.3□□□□□ -0.28
ELL3Q9HB65 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ELL3Q9HB65 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ELL3Q9HB65 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.3□□□□□ -0.28
ELL3Q9HB65 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ELL3Q9HB65 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.3□□□□□ -0.28
ELL3Q9HB65 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ELL3Q9HB65 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.3□□□□□ -0.28
ELL3Q9HB65 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ELL3Q9HB65 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ELL3Q9HB65 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ELL3Q9HB65 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
ELL3Q9HB65 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ELL3Q9HB65 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms