Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 DFFBP1-201ENST00000433250 979 ntBASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 TSPY16P-201ENST00000449843 468 ntBASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 GAPDHP40-201ENST00000505218 1006 ntBASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 AC026410.3-201ENST00000514280 936 ntBASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 AL138799.1-201ENST00000448213 1675 ntBASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM54Q9BYV2 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 SLC7A15P-201ENST00000424028 1363 ntBASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 AC007787.1-201ENST00000588095 1583 ntBASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 AC134915.1-201ENST00000426461 574 ntBASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 VDAC1P7-201ENST00000462417 847 ntBASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 AC107373.2-201ENST00000607735 490 ntBASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 AC093726.1-201ENST00000608064 963 ntBASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 ACE3P-201ENST00000423435 1973 ntBASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM54Q9BYV2 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms