Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 TIMM8BP1-201ENST00000452384 211 ntBASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 REXO1L8P-201ENST00000604378 1897 ntBASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 BX324167.2-201ENST00000623717 3316 ntBASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 LOX-206ENST00000639739 1626 ntTSL 5 BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 INTS4P1-203ENST00000641008 3683 ntBASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 STOM-202ENST00000347359 870 ntTSL 2 BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 AL671277.1-201ENST00000429656 993 ntBASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 THTPA-204ENST00000554970 569 ntTSL 4 BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 THTPA-206ENST00000556015 535 ntTSL 3 BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 AC025678.2-201ENST00000562061 970 ntBASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 METTL23-205ENST00000588302 925 ntTSL 5 BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 AC026120.1-201ENST00000611536 926 ntBASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 AL513210.1-201ENST00000629608 234 ntBASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 AC105339.1-204ENST00000636249 355 ntBASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 AC011477.6-201ENST00000604980 1927 ntBASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFAF3Q9BU61 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms