Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLCC1Q96S66 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLCC1Q96S66 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLCC1Q96S66 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLCC1Q96S66 HLA-H-201ENST00000383620 1096 ntBASIC12.87□□□□□ -0.35
CLCC1Q96S66 KRT18P13-201ENST00000400056 1290 ntBASIC12.87□□□□□ -0.35
CLCC1Q96S66 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLCC1Q96S66 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.87□□□□□ -0.35
CLCC1Q96S66 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.87□□□□□ -0.35
CLCC1Q96S66 AC061975.2-201ENST00000581722 295 ntBASIC12.87□□□□□ -0.35
CLCC1Q96S66 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.87□□□□□ -0.35
CLCC1Q96S66 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
CLCC1Q96S66 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CLCC1Q96S66 AC090616.6-203ENST00000579186 1945 ntBASIC12.87□□□□□ -0.35
CLCC1Q96S66 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CLCC1Q96S66 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLCC1Q96S66 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLCC1Q96S66 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLCC1Q96S66 FGD5P1-202ENST00000614866 2498 ntBASIC12.87□□□□□ -0.35
CLCC1Q96S66 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CLCC1Q96S66 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLCC1Q96S66 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLCC1Q96S66 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLCC1Q96S66 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLCC1Q96S66 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CLCC1Q96S66 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CLCC1Q96S66 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.87□□□□□ -0.35
CLCC1Q96S66 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLCC1Q96S66 AC105250.1-201ENST00000509378 2057 ntBASIC12.87□□□□□ -0.35
CLCC1Q96S66 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
CLCC1Q96S66 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CLCC1Q96S66 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.87□□□□□ -0.35
CLCC1Q96S66 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CLCC1Q96S66 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLCC1Q96S66 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.87□□□□□ -0.35
CLCC1Q96S66 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLCC1Q96S66 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.87□□□□□ -0.35
CLCC1Q96S66 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CLCC1Q96S66 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.86□□□□□ -0.35
CLCC1Q96S66 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CLCC1Q96S66 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CLCC1Q96S66 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.86□□□□□ -0.35
CLCC1Q96S66 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.86□□□□□ -0.35
CLCC1Q96S66 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.86□□□□□ -0.35
CLCC1Q96S66 AGAP7P-201ENST00000582299 2062 ntBASIC12.86□□□□□ -0.35
CLCC1Q96S66 AGAP14-201ENST00000624701 2060 ntBASIC12.86□□□□□ -0.35
CLCC1Q96S66 AL928921.2-201ENST00000641325 2442 ntBASIC12.86□□□□□ -0.35
CLCC1Q96S66 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.86□□□□□ -0.35
CLCC1Q96S66 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.86□□□□□ -0.35
CLCC1Q96S66 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.86□□□□□ -0.35
CLCC1Q96S66 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 FAM58DP-201ENST00000428076 619 ntBASIC12.86□□□□□ -0.35
CLCC1Q96S66 RBPMS2P1-201ENST00000437762 623 ntBASIC12.86□□□□□ -0.35
CLCC1Q96S66 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 YBX1P5-201ENST00000509441 847 ntBASIC12.86□□□□□ -0.35
CLCC1Q96S66 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.86□□□□□ -0.35
CLCC1Q96S66 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.86□□□□□ -0.35
CLCC1Q96S66 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.86□□□□□ -0.35
CLCC1Q96S66 SNHG9-202ENST00000564014 471 ntBASIC12.86□□□□□ -0.35
CLCC1Q96S66 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.86□□□□□ -0.35
CLCC1Q96S66 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.86□□□□□ -0.35
CLCC1Q96S66 AC004835.2-201ENST00000603762 682 ntBASIC12.86□□□□□ -0.35
CLCC1Q96S66 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 AC003101.2-201ENST00000612557 442 ntBASIC12.86□□□□□ -0.35
CLCC1Q96S66 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.86□□□□□ -0.35
CLCC1Q96S66 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CLCC1Q96S66 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.86□□□□□ -0.35
CLCC1Q96S66 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 AJ011931.1-201ENST00000618749 2492 ntBASIC12.86□□□□□ -0.35
CLCC1Q96S66 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CLCC1Q96S66 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.86□□□□□ -0.35
CLCC1Q96S66 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CLCC1Q96S66 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.86□□□□□ -0.35
CLCC1Q96S66 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 AC092127.1-201ENST00000567093 3455 ntBASIC12.86□□□□□ -0.35
CLCC1Q96S66 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCC1Q96S66 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.86□□□□□ -0.35
CLCC1Q96S66 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms