Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 AC023090.2-201ENST00000625182 2110 ntBASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NSMCE2Q96MF7 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NSMCE2Q96MF7 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NSMCE2Q96MF7 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NSMCE2Q96MF7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NSMCE2Q96MF7 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NSMCE2Q96MF7 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NSMCE2Q96MF7 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 PEG13-201ENST00000631594 5667 ntBASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NSMCE2Q96MF7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 AC089987.1-201ENST00000551654 2209 ntBASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 MED15P5-201ENST00000423150 992 ntBASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 AL450487.1-201ENST00000426799 995 ntBASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 KRT18P64-201ENST00000434946 1219 ntBASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 ALG1L8P-201ENST00000533887 760 ntBASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 AC027601.4-201ENST00000611259 610 ntBASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NSMCE2Q96MF7 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms