Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 AL844908.2-201ENST00000609461 460 ntBASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 AC074044.1-201ENST00000609673 707 ntBASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 AL645728.2-202ENST00000641679 227 ntBASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 AC067930.6-201ENST00000623257 4947 ntBASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 KRT8P14-201ENST00000414254 1442 ntBASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 PTENP1-202ENST00000532280 3996 ntBASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 AC004790.1-201ENST00000612686 536 ntBASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 CLK3P2-201ENST00000427566 1453 ntBASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 AL137784.3-201ENST00000623858 2288 ntBASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC17.55■□□□□ 0.4
CHAMP1Q96JM3 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 CICP8-201ENST00000455800 2813 ntBASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 Z92544.3-201ENST00000624747 417 ntBASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 AC130686.1-201ENST00000622936 2466 ntBASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHAMP1Q96JM3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHAMP1Q96JM3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.53■□□□□ 0.4
CHAMP1Q96JM3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.53■□□□□ 0.4
CHAMP1Q96JM3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC17.53■□□□□ 0.4
CHAMP1Q96JM3 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHAMP1Q96JM3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHAMP1Q96JM3 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CHAMP1Q96JM3 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms