Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX11Q96FC9 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX11Q96FC9 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX11Q96FC9 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX11Q96FC9 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
DDX11Q96FC9 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
DDX11Q96FC9 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.02■□□□□ 0.47
DDX11Q96FC9 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.02■□□□□ 0.47
DDX11Q96FC9 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
DDX11Q96FC9 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
DDX11Q96FC9 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
DDX11Q96FC9 REXO1L6P-201ENST00000603433 1515 ntBASIC18.02■□□□□ 0.47
DDX11Q96FC9 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
DDX11Q96FC9 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC18.02■□□□□ 0.47
DDX11Q96FC9 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.02■□□□□ 0.47
DDX11Q96FC9 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
DDX11Q96FC9 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
DDX11Q96FC9 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
DDX11Q96FC9 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
DDX11Q96FC9 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
DDX11Q96FC9 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX11Q96FC9 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX11Q96FC9 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
DDX11Q96FC9 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX11Q96FC9 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC18.01■□□□□ 0.47
DDX11Q96FC9 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX11Q96FC9 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX11Q96FC9 AC013726.1-201ENST00000563747 2285 ntBASIC18.01■□□□□ 0.47
DDX11Q96FC9 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC18.01■□□□□ 0.47
DDX11Q96FC9 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC18.01■□□□□ 0.47
DDX11Q96FC9 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
DDX11Q96FC9 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX11Q96FC9 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DDX11Q96FC9 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.01■□□□□ 0.47
DDX11Q96FC9 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX11Q96FC9 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DDX11Q96FC9 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DDX11Q96FC9 GHSR-202ENST00000427970 912 ntBASIC18.01■□□□□ 0.47
DDX11Q96FC9 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.01■□□□□ 0.47
DDX11Q96FC9 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
DDX11Q96FC9 VDAC1P7-201ENST00000462417 847 ntBASIC18.01■□□□□ 0.47
DDX11Q96FC9 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.01■□□□□ 0.47
DDX11Q96FC9 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.01■□□□□ 0.47
DDX11Q96FC9 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.01■□□□□ 0.47
DDX11Q96FC9 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.01■□□□□ 0.47
DDX11Q96FC9 AC120045.2-201ENST00000567334 178 ntBASIC18.01■□□□□ 0.47
DDX11Q96FC9 AC124283.3-201ENST00000570869 594 ntBASIC18.01■□□□□ 0.47
DDX11Q96FC9 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.01■□□□□ 0.47
DDX11Q96FC9 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.01■□□□□ 0.47
DDX11Q96FC9 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.01■□□□□ 0.47
DDX11Q96FC9 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DDX11Q96FC9 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX11Q96FC9 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX11Q96FC9 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX11Q96FC9 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.01■□□□□ 0.47
DDX11Q96FC9 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX11Q96FC9 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.01■□□□□ 0.47
DDX11Q96FC9 WASH3P-207ENST00000560956 1394 ntBASIC18.01■□□□□ 0.47
DDX11Q96FC9 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX11Q96FC9 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC18.01■□□□□ 0.47
DDX11Q96FC9 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX11Q96FC9 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DDX11Q96FC9 AC023908.3-201ENST00000564211 3047 ntBASIC18.01■□□□□ 0.47
DDX11Q96FC9 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
DDX11Q96FC9 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX11Q96FC9 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DDX11Q96FC9 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
DDX11Q96FC9 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX11Q96FC9 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
DDX11Q96FC9 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX11Q96FC9 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC18■□□□□ 0.47
DDX11Q96FC9 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX11Q96FC9 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX11Q96FC9 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX11Q96FC9 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX11Q96FC9 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
DDX11Q96FC9 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
DDX11Q96FC9 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18■□□□□ 0.47
DDX11Q96FC9 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18■□□□□ 0.47
DDX11Q96FC9 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
DDX11Q96FC9 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX11Q96FC9 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
DDX11Q96FC9 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX11Q96FC9 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18■□□□□ 0.47
DDX11Q96FC9 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18■□□□□ 0.47
DDX11Q96FC9 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX11Q96FC9 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18■□□□□ 0.47
DDX11Q96FC9 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18■□□□□ 0.47
DDX11Q96FC9 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18■□□□□ 0.47
DDX11Q96FC9 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX11Q96FC9 MFF-223ENST00000524634 647 ntTSL 2 BASIC18■□□□□ 0.47
DDX11Q96FC9 AC068587.3-201ENST00000526613 355 ntBASIC18■□□□□ 0.47
DDX11Q96FC9 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18■□□□□ 0.47
DDX11Q96FC9 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
DDX11Q96FC9 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18■□□□□ 0.47
DDX11Q96FC9 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18■□□□□ 0.47
DDX11Q96FC9 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18■□□□□ 0.47
DDX11Q96FC9 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
DDX11Q96FC9 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18■□□□□ 0.47
DDX11Q96FC9 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms