Protein–RNA interactions for Protein: Q8ND04

SMG8, Protein SMG8, humanhuman

Known RBP Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8Q8ND04 AC104073.2-201ENST00000453737 312 ntBASIC16.16■□□□□ 0.18
SMG8Q8ND04 TUBB8P8-201ENST00000458717 1058 ntBASIC16.16■□□□□ 0.18
SMG8Q8ND04 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.16■□□□□ 0.18
SMG8Q8ND04 AC100827.2-201ENST00000563214 1194 ntBASIC16.16■□□□□ 0.18
SMG8Q8ND04 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.16■□□□□ 0.18
SMG8Q8ND04 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SMG8Q8ND04 AC004923.1-202ENST00000642106 209 ntBASIC16.16■□□□□ 0.18
SMG8Q8ND04 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMG8Q8ND04 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SMG8Q8ND04 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMG8Q8ND04 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.16■□□□□ 0.18
SMG8Q8ND04 AC013268.4-201ENST00000637413 2228 ntBASIC16.16■□□□□ 0.18
SMG8Q8ND04 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SMG8Q8ND04 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.16■□□□□ 0.18
SMG8Q8ND04 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMG8Q8ND04 ACE3P-201ENST00000423435 1973 ntBASIC16.16■□□□□ 0.18
SMG8Q8ND04 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMG8Q8ND04 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.16■□□□□ 0.18
SMG8Q8ND04 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SMG8Q8ND04 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMG8Q8ND04 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMG8Q8ND04 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
SMG8Q8ND04 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMG8Q8ND04 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMG8Q8ND04 AC073347.1-201ENST00000421633 2643 ntBASIC16.15■□□□□ 0.18
SMG8Q8ND04 AC103702.1-201ENST00000548801 2630 ntBASIC16.15■□□□□ 0.18
SMG8Q8ND04 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMG8Q8ND04 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMG8Q8ND04 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SMG8Q8ND04 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SMG8Q8ND04 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMG8Q8ND04 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMG8Q8ND04 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SMG8Q8ND04 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMG8Q8ND04 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMG8Q8ND04 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SMG8Q8ND04 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.15■□□□□ 0.18
SMG8Q8ND04 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMG8Q8ND04 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMG8Q8ND04 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.15■□□□□ 0.18
SMG8Q8ND04 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.15■□□□□ 0.18
SMG8Q8ND04 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
SMG8Q8ND04 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
SMG8Q8ND04 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMG8Q8ND04 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMG8Q8ND04 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMG8Q8ND04 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
SMG8Q8ND04 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.15■□□□□ 0.18
SMG8Q8ND04 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SMG8Q8ND04 SLC25A24P2-201ENST00000415059 510 ntBASIC16.15■□□□□ 0.18
SMG8Q8ND04 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SMG8Q8ND04 KLF2P1-201ENST00000447438 1042 ntBASIC16.15■□□□□ 0.18
SMG8Q8ND04 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.15■□□□□ 0.18
SMG8Q8ND04 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMG8Q8ND04 ALG3P1-201ENST00000508806 1114 ntBASIC16.15■□□□□ 0.18
SMG8Q8ND04 AC005740.2-201ENST00000511085 419 ntBASIC16.15■□□□□ 0.18
SMG8Q8ND04 AC022217.1-201ENST00000521069 738 ntBASIC16.15■□□□□ 0.18
SMG8Q8ND04 AC131206.1-201ENST00000538078 1211 ntBASIC16.15■□□□□ 0.18
SMG8Q8ND04 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMG8Q8ND04 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.15■□□□□ 0.18
SMG8Q8ND04 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.15■□□□□ 0.18
SMG8Q8ND04 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.15■□□□□ 0.18
SMG8Q8ND04 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMG8Q8ND04 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMG8Q8ND04 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMG8Q8ND04 AC132192.2-201ENST00000596206 1147 ntBASIC16.15■□□□□ 0.18
SMG8Q8ND04 NDUFV2P1-201ENST00000596415 907 ntBASIC16.15■□□□□ 0.18
SMG8Q8ND04 AC008825.2-201ENST00000603374 718 ntBASIC16.15■□□□□ 0.18
SMG8Q8ND04 AL645939.5-201ENST00000606834 243 ntBASIC16.15■□□□□ 0.18
SMG8Q8ND04 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
SMG8Q8ND04 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMG8Q8ND04 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMG8Q8ND04 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.15■□□□□ 0.18
SMG8Q8ND04 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMG8Q8ND04 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMG8Q8ND04 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SMG8Q8ND04 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SMG8Q8ND04 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMG8Q8ND04 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SMG8Q8ND04 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
SMG8Q8ND04 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SMG8Q8ND04 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SMG8Q8ND04 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMG8Q8ND04 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.14■□□□□ 0.17
SMG8Q8ND04 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMG8Q8ND04 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SMG8Q8ND04 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMG8Q8ND04 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMG8Q8ND04 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMG8Q8ND04 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMG8Q8ND04 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.14■□□□□ 0.17
SMG8Q8ND04 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMG8Q8ND04 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SMG8Q8ND04 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMG8Q8ND04 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.14■□□□□ 0.17
SMG8Q8ND04 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.14■□□□□ 0.17
SMG8Q8ND04 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMG8Q8ND04 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMG8Q8ND04 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMG8Q8ND04 CYP46A4P-201ENST00000414953 267 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms