Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 AQP7P3-201ENST00000624547 1041 ntBASIC17.91■□□□□ 0.46
SLX4Q8IY92 KHSRPP1-201ENST00000427983 1768 ntBASIC17.91■□□□□ 0.46
SLX4Q8IY92 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.91■□□□□ 0.46
SLX4Q8IY92 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLX4Q8IY92 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SLX4Q8IY92 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLX4Q8IY92 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLX4Q8IY92 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLX4Q8IY92 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLX4Q8IY92 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.9■□□□□ 0.46
SLX4Q8IY92 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SLX4Q8IY92 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.9■□□□□ 0.46
SLX4Q8IY92 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLX4Q8IY92 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SLX4Q8IY92 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLX4Q8IY92 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SLX4Q8IY92 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SLX4Q8IY92 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLX4Q8IY92 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLX4Q8IY92 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SLX4Q8IY92 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLX4Q8IY92 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.9■□□□□ 0.46
SLX4Q8IY92 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLX4Q8IY92 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLX4Q8IY92 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLX4Q8IY92 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SLX4Q8IY92 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC17.9■□□□□ 0.46
SLX4Q8IY92 RGS5-216ENST00000449680 788 ntTSL 3 BASIC17.9■□□□□ 0.46
SLX4Q8IY92 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC17.9■□□□□ 0.46
SLX4Q8IY92 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.9■□□□□ 0.46
SLX4Q8IY92 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.9■□□□□ 0.46
SLX4Q8IY92 AC124068.2-201ENST00000569473 1109 ntBASIC17.9■□□□□ 0.46
SLX4Q8IY92 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC17.9■□□□□ 0.46
SLX4Q8IY92 AC012073.1-201ENST00000606114 1108 ntBASIC17.9■□□□□ 0.46
SLX4Q8IY92 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLX4Q8IY92 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLX4Q8IY92 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.9■□□□□ 0.46
SLX4Q8IY92 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLX4Q8IY92 SSR4P1-203ENST00000599569 2260 ntBASIC17.9■□□□□ 0.46
SLX4Q8IY92 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
SLX4Q8IY92 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.89■□□□□ 0.46
SLX4Q8IY92 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.89■□□□□ 0.45
SLX4Q8IY92 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLX4Q8IY92 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLX4Q8IY92 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SLX4Q8IY92 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLX4Q8IY92 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLX4Q8IY92 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SLX4Q8IY92 AC108734.2-201ENST00000420887 1069 ntBASIC17.89■□□□□ 0.45
SLX4Q8IY92 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC17.89■□□□□ 0.45
SLX4Q8IY92 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.89■□□□□ 0.45
SLX4Q8IY92 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC17.89■□□□□ 0.45
SLX4Q8IY92 AC068867.1-201ENST00000559855 150 ntBASIC17.89■□□□□ 0.45
SLX4Q8IY92 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC17.89■□□□□ 0.45
SLX4Q8IY92 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC17.89■□□□□ 0.45
SLX4Q8IY92 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC17.89■□□□□ 0.45
SLX4Q8IY92 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC17.89■□□□□ 0.45
SLX4Q8IY92 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC17.89■□□□□ 0.45
SLX4Q8IY92 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLX4Q8IY92 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.89■□□□□ 0.45
SLX4Q8IY92 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SLX4Q8IY92 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLX4Q8IY92 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLX4Q8IY92 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
SLX4Q8IY92 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLX4Q8IY92 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC17.89■□□□□ 0.45
SLX4Q8IY92 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLX4Q8IY92 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLX4Q8IY92 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC17.89■□□□□ 0.45
SLX4Q8IY92 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.89■□□□□ 0.45
SLX4Q8IY92 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.89■□□□□ 0.45
SLX4Q8IY92 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLX4Q8IY92 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLX4Q8IY92 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLX4Q8IY92 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLX4Q8IY92 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.89■□□□□ 0.45
SLX4Q8IY92 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.89■□□□□ 0.45
SLX4Q8IY92 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLX4Q8IY92 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLX4Q8IY92 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SLX4Q8IY92 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC17.88■□□□□ 0.45
SLX4Q8IY92 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC17.88■□□□□ 0.45
SLX4Q8IY92 THY1-209ENST00000580275 578 ntTSL 3 BASIC17.88■□□□□ 0.45
SLX4Q8IY92 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SLX4Q8IY92 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.88■□□□□ 0.45
SLX4Q8IY92 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SLX4Q8IY92 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLX4Q8IY92 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLX4Q8IY92 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLX4Q8IY92 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLX4Q8IY92 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
SLX4Q8IY92 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.88■□□□□ 0.45
SLX4Q8IY92 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLX4Q8IY92 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SLX4Q8IY92 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLX4Q8IY92 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLX4Q8IY92 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLX4Q8IY92 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLX4Q8IY92 SCARNA12-201ENST00000459155 270 ntBASIC17.88■□□□□ 0.45
SLX4Q8IY92 RN7SL530P-201ENST00000485097 298 ntBASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms