Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 GCOM2-201ENST00000509133 1104 ntBASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
NPAS4Q8IUM7 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS4Q8IUM7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.02■□□□□ 0.15
NPAS4Q8IUM7 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.02■□□□□ 0.15
NPAS4Q8IUM7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
NPAS4Q8IUM7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS4Q8IUM7 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.02■□□□□ 0.15
NPAS4Q8IUM7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
NPAS4Q8IUM7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
NPAS4Q8IUM7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.02■□□□□ 0.15
NPAS4Q8IUM7 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.02■□□□□ 0.15
NPAS4Q8IUM7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS4Q8IUM7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
NPAS4Q8IUM7 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.02■□□□□ 0.15
NPAS4Q8IUM7 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS4Q8IUM7 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS4Q8IUM7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS4Q8IUM7 ZBED1P1-201ENST00000502364 1930 ntBASIC16.02■□□□□ 0.15
NPAS4Q8IUM7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.02■□□□□ 0.15
NPAS4Q8IUM7 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 AC023090.2-201ENST00000625182 2110 ntBASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 RN7SL258P-201ENST00000478664 300 ntBASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 AC006122.1-201ENST00000493323 440 ntBASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 AC131206.1-201ENST00000538078 1211 ntBASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 AC073352.2-201ENST00000609385 439 ntBASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 AL157813.1-201ENST00000612996 587 ntBASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 COX6A1P2-201ENST00000620597 330 ntBASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.01■□□□□ 0.15
NPAS4Q8IUM7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS4Q8IUM7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms