Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 AL627223.1-201ENST00000416693 442 ntBASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 RBPMS2P1-201ENST00000437762 623 ntBASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 AC026150.2-201ENST00000564693 1156 ntBASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 AC120114.3-201ENST00000611923 658 ntBASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 AL157414.3-201ENST00000624276 1954 ntBASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 AC089987.1-201ENST00000551654 2209 ntBASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 AC004832.2-201ENST00000426397 482 ntBASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 MIR4453-201ENST00000584019 89 ntBASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms