Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC138969.3-201ENST00000546612 1459 ntBASIC13.75□□□□□ -0.21
SHFQ7M4L6 AC138932.2-201ENST00000548268 1459 ntBASIC13.75□□□□□ -0.21
SHFQ7M4L6 AC126755.4-201ENST00000549796 1459 ntBASIC13.75□□□□□ -0.21
SHFQ7M4L6 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHFQ7M4L6 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 AC152010.1-201ENST00000415779 2006 ntBASIC13.75□□□□□ -0.21
SHFQ7M4L6 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHFQ7M4L6 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHFQ7M4L6 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHFQ7M4L6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHFQ7M4L6 AL133267.1-201ENST00000398220 340 ntBASIC13.75□□□□□ -0.21
SHFQ7M4L6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHFQ7M4L6 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHFQ7M4L6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHFQ7M4L6 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHFQ7M4L6 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 Z97205.2-201ENST00000564697 1639 ntBASIC13.75□□□□□ -0.21
SHFQ7M4L6 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHFQ7M4L6 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHFQ7M4L6 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SHFQ7M4L6 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.74□□□□□ -0.21
SHFQ7M4L6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SHFQ7M4L6 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.74□□□□□ -0.21
SHFQ7M4L6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.74□□□□□ -0.21
SHFQ7M4L6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.74□□□□□ -0.21
SHFQ7M4L6 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.74□□□□□ -0.21
SHFQ7M4L6 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.74□□□□□ -0.21
SHFQ7M4L6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.74□□□□□ -0.21
SHFQ7M4L6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.74□□□□□ -0.21
SHFQ7M4L6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.74□□□□□ -0.21
SHFQ7M4L6 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SHFQ7M4L6 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.74□□□□□ -0.21
SHFQ7M4L6 AL671883.3-201ENST00000603274 991 ntBASIC13.74□□□□□ -0.21
SHFQ7M4L6 AC025181.2-201ENST00000606994 802 ntBASIC13.74□□□□□ -0.21
SHFQ7M4L6 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.74□□□□□ -0.21
SHFQ7M4L6 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.74□□□□□ -0.21
SHFQ7M4L6 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.74□□□□□ -0.21
SHFQ7M4L6 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.74□□□□□ -0.21
SHFQ7M4L6 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.74□□□□□ -0.21
SHFQ7M4L6 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.74□□□□□ -0.21
SHFQ7M4L6 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SHFQ7M4L6 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.74□□□□□ -0.21
SHFQ7M4L6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.74□□□□□ -0.21
SHFQ7M4L6 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.74□□□□□ -0.21
SHFQ7M4L6 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SHFQ7M4L6 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SHFQ7M4L6 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHFQ7M4L6 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SHFQ7M4L6 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms