Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13CQ709C8 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.24□□□□□ -0.45
VPS13CQ709C8 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13CQ709C8 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.24□□□□□ -0.45
VPS13CQ709C8 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC12.24□□□□□ -0.45
VPS13CQ709C8 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
VPS13CQ709C8 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13CQ709C8 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13CQ709C8 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.24□□□□□ -0.45
VPS13CQ709C8 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13CQ709C8 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13CQ709C8 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13CQ709C8 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13CQ709C8 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13CQ709C8 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13CQ709C8 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13CQ709C8 AL357373.1-201ENST00000394974 322 ntBASIC12.24□□□□□ -0.45
VPS13CQ709C8 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC12.24□□□□□ -0.45
VPS13CQ709C8 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC12.24□□□□□ -0.45
VPS13CQ709C8 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.24□□□□□ -0.45
VPS13CQ709C8 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.24□□□□□ -0.45
VPS13CQ709C8 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.24□□□□□ -0.45
VPS13CQ709C8 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.24□□□□□ -0.45
VPS13CQ709C8 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
VPS13CQ709C8 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.24□□□□□ -0.45
VPS13CQ709C8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13CQ709C8 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13CQ709C8 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.24□□□□□ -0.45
VPS13CQ709C8 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13CQ709C8 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13CQ709C8 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13CQ709C8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13CQ709C8 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.24□□□□□ -0.45
VPS13CQ709C8 COX20P1-201ENST00000366529 357 ntBASIC12.24□□□□□ -0.45
VPS13CQ709C8 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
VPS13CQ709C8 AC133540.1-201ENST00000620845 1019 ntBASIC12.24□□□□□ -0.45
VPS13CQ709C8 CTBP2P8-201ENST00000422584 1330 ntBASIC12.24□□□□□ -0.45
VPS13CQ709C8 FRMPD2B-201ENST00000431305 1347 ntBASIC12.24□□□□□ -0.45
VPS13CQ709C8 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.24□□□□□ -0.45
VPS13CQ709C8 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
VPS13CQ709C8 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.24□□□□□ -0.45
VPS13CQ709C8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC12.24□□□□□ -0.45
VPS13CQ709C8 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13CQ709C8 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13CQ709C8 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC12.24□□□□□ -0.45
VPS13CQ709C8 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13CQ709C8 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13CQ709C8 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13CQ709C8 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13CQ709C8 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13CQ709C8 STK16-203ENST00000409516 895 ntTSL 2 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 AC093752.3-201ENST00000567343 901 ntBASIC12.23□□□□□ -0.45
VPS13CQ709C8 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 AC008825.2-201ENST00000603374 718 ntBASIC12.23□□□□□ -0.45
VPS13CQ709C8 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13CQ709C8 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13CQ709C8 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13CQ709C8 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13CQ709C8 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13CQ709C8 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13CQ709C8 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13CQ709C8 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 AC106047.2-201ENST00000511723 743 ntBASIC12.23□□□□□ -0.45
VPS13CQ709C8 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13CQ709C8 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13CQ709C8 KRT17P5-201ENST00000332088 839 ntBASIC12.23□□□□□ -0.45
VPS13CQ709C8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13CQ709C8 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13CQ709C8 AL627230.2-201ENST00000613254 655 ntBASIC12.23□□□□□ -0.45
VPS13CQ709C8 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.23□□□□□ -0.45
VPS13CQ709C8 AC011471.3-201ENST00000623576 402 ntBASIC12.23□□□□□ -0.45
VPS13CQ709C8 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC12.23□□□□□ -0.45
VPS13CQ709C8 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms