Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 AL590627.1-203ENST00000421194 1026 ntBASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 KRT18P32-201ENST00000424695 1287 ntBASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 AL079307.3-201ENST00000556114 283 ntBASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 GPR39-203ENST00000622084 900 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 C20orf181-201ENST00000623918 480 ntBASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 AF228730.6-201ENST00000641497 218 ntBASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 AC084121.3-201ENST00000641716 218 ntBASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 MVK-214ENST00000629016 1591 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00242Q5T6M2 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms