Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 REXO1L1P-202ENST00000608646 1974 ntBASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 KRT43P-201ENST00000434019 910 ntBASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 AC123567.1-201ENST00000548294 1261 ntBASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 AC024267.1-201ENST00000582320 895 ntBASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 AL133215.2-201ENST00000609242 977 ntBASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 AC068587.10-201ENST00000641210 219 ntBASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 AL390755.1-201ENST00000623716 2027 ntBASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRFAM7AQ494W8 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 AC023024.2-201ENST00000623561 1993 ntBASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 FGD5P1-202ENST00000614866 2498 ntBASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms