Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 ORAOV1P1-201ENST00000503108 395 ntBASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RSPO4Q2I0M5 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 PCDHA1-201ENST00000378133 2726 ntBASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 CICP6-201ENST00000457191 2729 ntBASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO4Q2I0M5 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms