Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 PTK7-212ENST00000476760 902 ntTSL 2 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 DAD1-205ENST00000543337 501 ntTSL 3 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 COL6A4P2-202ENST00000504443 2753 ntBASIC11.68□□□□□ -0.54
HIST1H1AQ02539 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 MBLAC2-202ENST00000514906 1936 ntBASIC11.68□□□□□ -0.54
HIST1H1AQ02539 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 AC084364.1-201ENST00000551967 1556 ntBASIC11.68□□□□□ -0.54
HIST1H1AQ02539 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 HIST3H2BA-201ENST00000436555 524 ntBASIC11.68□□□□□ -0.54
HIST1H1AQ02539 TARDBPP1-201ENST00000442013 1203 ntBASIC11.68□□□□□ -0.54
HIST1H1AQ02539 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 CMC2-214ENST00000565925 640 ntTSL 5 BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 LINC00628-201ENST00000628516 1289 ntBASIC11.68□□□□□ -0.54
HIST1H1AQ02539 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
HIST1H1AQ02539 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms