Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 Z98259.2-201ENST00000641583 609 ntBASIC13.8□□□□□ -0.2
CACNA1BQ00975 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CACNA1BQ00975 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CACNA1BQ00975 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CACNA1BQ00975 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CACNA1BQ00975 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CACNA1BQ00975 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CACNA1BQ00975 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 RPSAP15-201ENST00000448168 861 ntBASIC13.79□□□□□ -0.2
CACNA1BQ00975 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CACNA1BQ00975 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CACNA1BQ00975 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CACNA1BQ00975 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CACNA1BQ00975 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CACNA1BQ00975 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CACNA1BQ00975 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CACNA1BQ00975 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CACNA1BQ00975 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CACNA1BQ00975 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CACNA1BQ00975 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CACNA1BQ00975 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CACNA1BQ00975 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CACNA1BQ00975 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 CDK4P1-201ENST00000454213 828 ntBASIC13.79□□□□□ -0.2
CACNA1BQ00975 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 AC092896.1-201ENST00000465850 380 ntBASIC13.79□□□□□ -0.2
CACNA1BQ00975 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC13.79□□□□□ -0.2
CACNA1BQ00975 AC005962.1-201ENST00000584100 773 ntBASIC13.79□□□□□ -0.2
CACNA1BQ00975 AP000322.3-201ENST00000608665 388 ntBASIC13.79□□□□□ -0.2
CACNA1BQ00975 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC13.79□□□□□ -0.2
CACNA1BQ00975 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CACNA1BQ00975 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CACNA1BQ00975 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CACNA1BQ00975 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.78□□□□□ -0.2
CACNA1BQ00975 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CACNA1BQ00975 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CACNA1BQ00975 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CACNA1BQ00975 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CACNA1BQ00975 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CACNA1BQ00975 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
CACNA1BQ00975 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CACNA1BQ00975 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
CACNA1BQ00975 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.78□□□□□ -0.2
CACNA1BQ00975 POLR2LP1-206ENST00000444785 187 ntBASIC13.78□□□□□ -0.2
CACNA1BQ00975 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CACNA1BQ00975 AC068867.1-201ENST00000559855 150 ntBASIC13.78□□□□□ -0.2
CACNA1BQ00975 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC13.78□□□□□ -0.2
CACNA1BQ00975 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC13.78□□□□□ -0.2
CACNA1BQ00975 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CACNA1BQ00975 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
CACNA1BQ00975 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CACNA1BQ00975 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.78□□□□□ -0.2
CACNA1BQ00975 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CACNA1BQ00975 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CACNA1BQ00975 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
CACNA1BQ00975 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CACNA1BQ00975 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CACNA1BQ00975 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CACNA1BQ00975 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CACNA1BQ00975 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CACNA1BQ00975 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CACNA1BQ00975 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CACNA1BQ00975 AL050341.2-201ENST00000567508 1541 ntBASIC13.78□□□□□ -0.2
CACNA1BQ00975 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CACNA1BQ00975 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
CACNA1BQ00975 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
CACNA1BQ00975 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CACNA1BQ00975 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CACNA1BQ00975 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms